BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003840
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS46110.1| photosystem II M protein [Oryza sativa Japonica G...    70   3e-12
ref|XP_002888353.1| hypothetical protein ARALYDRAFT_893970 [Arab...    73   7e-12
gb|ADD63094.1| photosystem II protein M [Microlaena stipoides]         68   1e-10
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    72   1e-10
gb|ADD63027.1| photosystem II protein M [Potamophila parviflora]       70   2e-10

>gb|AAS46110.1| photosystem II M protein [Oryza sativa Japonica Group]
           gi|42795608|gb|AAS46173.1| photosystem II M protein
           [Oryza sativa Japonica Group]
           gi|290790563|gb|ADD62823.1| photosystem II protein M
           [Oryza sativa Japonica Group]
           gi|290790632|gb|ADD62891.1| photosystem II protein M
           [Oryza meridionalis] gi|290790701|gb|ADD62959.1|
           photosystem II protein M [Oryza australiensis]
          Length = 69

 Score = 69.7 bits (169), Expect(2) = 3e-12
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +3

Query: 390 EIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 497
           E+MEVNILAFIATALFILVPTAFLLIIYVKTVSQND
Sbjct: 34  EVMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 69



 Score = 27.3 bits (59), Expect(2) = 3e-12
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 343 SLWD*IPSYCEIKKTMRL 396
           S WD IPSYCE K+ M +
Sbjct: 21  SPWDYIPSYCEKKEVMEV 38


>ref|XP_002888353.1| hypothetical protein ARALYDRAFT_893970 [Arabidopsis lyrata subsp.
           lyrata] gi|297334194|gb|EFH64612.1| hypothetical protein
           ARALYDRAFT_893970 [Arabidopsis lyrata subsp. lyrata]
          Length = 120

 Score = 72.8 bits (177), Expect(2) = 7e-12
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = -2

Query: 515 FHLK*LIILTDCFYVNDK*KSSRN*NEQCSSNKCKNIYFHNLIVFF 378
           FHL  LIILT+ FYVN K KSSRN NE+C SNKCKNIYFHNLIV++
Sbjct: 62  FHLFKLIILTNGFYVNYKQKSSRNENEECGSNKCKNIYFHNLIVYY 107



 Score = 23.1 bits (48), Expect(2) = 7e-12
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 384 FFYFTITRDLIP 349
           +F+F I+RDLIP
Sbjct: 109 YFFFLISRDLIP 120


>gb|ADD63094.1| photosystem II protein M [Microlaena stipoides]
          Length = 69

 Score = 68.2 bits (165), Expect(2) = 1e-10
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = +3

Query: 390 EIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 497
           E+MEVNILAFIATALFILVPTAFLLIIYVKT SQND
Sbjct: 34  EVMEVNILAFIATALFILVPTAFLLIIYVKTASQND 69



 Score = 23.9 bits (50), Expect(2) = 1e-10
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 328 VKDLSSLWD*IPSYCEIKKTMRL 396
           V    S WD IPSY E K+ M +
Sbjct: 16  VSPFPSPWDYIPSYYEKKEVMEV 38


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +3

Query: 378 KKNDEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 497
           K+N EIMEVNILAFIATALFILVPTAFLLIIYVKTVSQ+D
Sbjct: 125 KENIEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQSD 164


>gb|ADD63027.1| photosystem II protein M [Potamophila parviflora]
          Length = 69

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/61 (67%), Positives = 43/61 (70%)
 Frame = +3

Query: 315 IELTGERFIISMGLNPELL*NKKNDEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQN 494
           +E TG  F       P     K   E+MEVNILAFIATALFILVPTAFLLIIYVKTVSQN
Sbjct: 12  LEFTGYPFYSPWDYIPSYCEKK---EVMEVNILAFIATALFILVPTAFLLIIYVKTVSQN 68

Query: 495 D 497
           D
Sbjct: 69  D 69