BLASTX nr result

ID: Atractylodes22_contig00003818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003818
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12354.1|PSAE_SPIOL RecName: Full=Photosystem I reaction cent...   107   1e-21
ref|XP_002266424.1| PREDICTED: photosystem I reaction center sub...   106   2e-21
sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction cen...   105   4e-21
pdb|3LW5|E Chain E, Improved Model Of Plant Photosystem I             105   6e-21
ref|NP_001240010.1| uncharacterized protein LOC100811078 [Glycin...   105   6e-21

>sp|P12354.1|PSAE_SPIOL RecName: Full=Photosystem I reaction center subunit IV,
           chloroplastic; Short=PSI-E; Flags: Precursor
           gi|21295|emb|CAA32183.1| unnamed protein product
           [Spinacia oleracea]
          Length = 125

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +2

Query: 392 IGPKRGAKVRILRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNYANVSTN 550
           IGPKRG+KVRI+RKESYWYKGVGSVV VDQDPKTRYPVVVRFNKVNYANVSTN
Sbjct: 62  IGPKRGSKVRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTN 114


>ref|XP_002266424.1| PREDICTED: photosystem I reaction center subunit IV A,
           chloroplastic-like [Vitis vinifera]
          Length = 143

 Score =  106 bits (265), Expect = 2e-21
 Identities = 67/138 (48%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
 Frame = +2

Query: 143 MATCNMASAA-GFIPVFYSN-TTASSSKPTSVSFLNFNNRGXXXXXXXXXXXXXXXXXXX 316
           MA+C+MASAA GF+     N TT  +S P+ V F   N+R                    
Sbjct: 1   MASCSMASAASGFVLTPTPNSTTKPTSTPSMVIFSPKNHRNSRLVVRASEGGPPPPPPPP 60

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXIGPKRGAKVRILRKESYWYKGVGSVVTVDQDPKTR 496
                                    IGPKRG KV+ILRKESYWY G+GSVV VDQDPKTR
Sbjct: 61  PPAPAPVAEGGAPPPKPPP------IGPKRGTKVKILRKESYWYNGIGSVVAVDQDPKTR 114

Query: 497 YPVVVRFNKVNYANVSTN 550
           YPVVVRFNKVNYANVSTN
Sbjct: 115 YPVVVRFNKVNYANVSTN 132


>sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction center subunit IV B,
           chloroplastic; Short=PSI-E B; Contains: RecName:
           Full=Photosystem I reaction center subunit IV B isoform
           2; Flags: Precursor gi|632724|gb|AAB31705.1| photosystem
           I subunit PSI-E [Nicotiana sylvestris]
          Length = 143

 Score =  105 bits (263), Expect = 4e-21
 Identities = 49/53 (92%), Positives = 50/53 (94%)
 Frame = +2

Query: 392 IGPKRGAKVRILRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNYANVSTN 550
           IGPKRG KVR+LRKESYWYKGVGSVV VDQDP TRYPVVVRFNKVNYANVSTN
Sbjct: 80  IGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFNKVNYANVSTN 132


>pdb|3LW5|E Chain E, Improved Model Of Plant Photosystem I
          Length = 64

 Score =  105 bits (261), Expect = 6e-21
 Identities = 49/53 (92%), Positives = 50/53 (94%)
 Frame = +2

Query: 392 IGPKRGAKVRILRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNYANVSTN 550
           IGPKRGAKV+ILRKESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTN
Sbjct: 1   IGPKRGAKVKILRKESYWYKGTGSVVAVDQDPNTRYPVVVRFNKVNYANVSTN 53


>ref|NP_001240010.1| uncharacterized protein LOC100811078 [Glycine max]
           gi|255638239|gb|ACU19433.1| unknown [Glycine max]
          Length = 129

 Score =  105 bits (261), Expect = 6e-21
 Identities = 49/53 (92%), Positives = 50/53 (94%)
 Frame = +2

Query: 392 IGPKRGAKVRILRKESYWYKGVGSVVTVDQDPKTRYPVVVRFNKVNYANVSTN 550
           IGPKRGAKV+ILRKESYWYKG GSVV VDQDP TRYPVVVRFNKVNYANVSTN
Sbjct: 66  IGPKRGAKVKILRKESYWYKGTGSVVAVDQDPNTRYPVVVRFNKVNYANVSTN 118


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