BLASTX nr result

ID: Atractylodes22_contig00003812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003812
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-lik...   476   e-132
ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   471   e-130
ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ric...   471   e-130
emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]   469   e-129
ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 iso...   466   e-129

>ref|XP_004147047.1| PREDICTED: pre-mRNA-splicing factor syf2-like [Cucumis sativus]
            gi|449489629|ref|XP_004158369.1| PREDICTED:
            pre-mRNA-splicing factor syf2-like [Cucumis sativus]
          Length = 310

 Score =  476 bits (1226), Expect = e-132
 Identities = 235/309 (76%), Positives = 265/309 (85%), Gaps = 1/309 (0%)
 Frame = +3

Query: 234  EGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNEPAGLQASTRSFQQTSVAARVQT 413
            EGR VHPDCRN+SNPYHECSEYCFKVIAE    + KNEP  +QA   S   + V      
Sbjct: 4    EGR-VHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPETVQAGRSSGSSSFVPPDEYE 62

Query: 414  ELPDNETSDPDDHPSGDGNN-AIEDQPEVDFTKLTGKQRKLFELRLKMNEARKANQTAMV 590
            +L D E  D + H  GD +  + E+  E DFTKLTG+++KLFE+RLKMNEARKANQTA+ 
Sbjct: 63   DLHD-EKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKANQTAIA 121

Query: 591  AEKKRMEAPQESRGISKQKWIEERKKKIGKLLDANGLDMTKAYMLDTQQMAETKYKKWEK 770
            AEKK+ME P ESRGISKQKW+E+RKKKIGKLLDANGLDMTKAYMLDTQ+ AE KYKKWEK
Sbjct: 122  AEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENKYKKWEK 181

Query: 771  EPAPAGWDVFNQKTLYDAYKKRTKNINVDLEEYSKMKEADPEFYREASSLQYGKAPKVSE 950
            +PAP GWDVFNQKTLY+AYKKRTKN+N+DLEEY+KMKE+DPEFYREASSLQYGKAPK+SE
Sbjct: 182  DPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISE 241

Query: 951  DKVERMVKELKDRDEKRNTFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGRYTLEIKNN 1130
            DK++ MVKELKDRDEKR +FSRRR+FHE+KDIDSINDRNEHFNKKIERAFGRYTLEIKNN
Sbjct: 242  DKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNN 301

Query: 1131 LERGTALPD 1157
            LERGTALPD
Sbjct: 302  LERGTALPD 310


>ref|XP_002279493.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 1 [Vitis vinifera]
            gi|297744598|emb|CBI37860.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  471 bits (1213), Expect = e-130
 Identities = 233/313 (74%), Positives = 262/313 (83%), Gaps = 3/313 (0%)
 Frame = +3

Query: 228  MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNEPAGLQASTRSF---QQTSVA 398
            M   R VHPDC N+SNPYHEC EYCF+ IAEA     K E   ++A + S     Q    
Sbjct: 1    MAGERRVHPDCINASNPYHECVEYCFRKIAEAKAQMDKKESEVMEAGSGSGGGNDQYISG 60

Query: 399  ARVQTELPDNETSDPDDHPSGDGNNAIEDQPEVDFTKLTGKQRKLFELRLKMNEARKANQ 578
               Q +   +E +DP++    D +  +E+  EVDFT+LTG+Q+KLFELRLKMNEARKANQ
Sbjct: 61   VPDQDKNTHDEGTDPEERSDDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQ 120

Query: 579  TAMVAEKKRMEAPQESRGISKQKWIEERKKKIGKLLDANGLDMTKAYMLDTQQMAETKYK 758
            TAMVAEKK+MEAP ESRGISKQKWIEERKKKIGKLLD NGLDM KAYMLDTQ+MAETKYK
Sbjct: 121  TAMVAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYK 180

Query: 759  KWEKEPAPAGWDVFNQKTLYDAYKKRTKNINVDLEEYSKMKEADPEFYREASSLQYGKAP 938
            KWEK+PAP GWDVFNQKTLY+AYKKRTKNI VD++EY+KMKEADPEFYREASSLQYGKAP
Sbjct: 181  KWEKDPAPFGWDVFNQKTLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAP 240

Query: 939  KVSEDKVERMVKELKDRDEKRNTFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGRYTLE 1118
            K SEDK+++MVKELKDRDEKR +FSRRR+FHEEKDIDSINDRNEHFNKKIERAFG+YTLE
Sbjct: 241  KCSEDKIDKMVKELKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLE 300

Query: 1119 IKNNLERGTALPD 1157
            IKNNLERGTALPD
Sbjct: 301  IKNNLERGTALPD 313


>ref|XP_002521291.1| Pre-mRNA-splicing factor syf2, putative [Ricinus communis]
            gi|223539559|gb|EEF41147.1| Pre-mRNA-splicing factor
            syf2, putative [Ricinus communis]
          Length = 308

 Score =  471 bits (1213), Expect = e-130
 Identities = 237/310 (76%), Positives = 263/310 (84%)
 Frame = +3

Query: 228  MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNEPAGLQASTRSFQQTSVAARV 407
            M E R VHPDC N+SNPYHEC EYCF+ IAEA     K E   LQ    S Q T++A+  
Sbjct: 1    MAEERRVHPDCINASNPYHECVEYCFRKIAEAKVRTGKLEEEILQDKKASGQSTALASE- 59

Query: 408  QTELPDNETSDPDDHPSGDGNNAIEDQPEVDFTKLTGKQRKLFELRLKMNEARKANQTAM 587
            Q E+  ++  D  +    D N A++D  E D TKLTG+Q+KLFELRLKMNEARKANQTAM
Sbjct: 60   QDEVQHDQRPDFGEDSDDDSNPAVQDNVE-DVTKLTGRQKKLFELRLKMNEARKANQTAM 118

Query: 588  VAEKKRMEAPQESRGISKQKWIEERKKKIGKLLDANGLDMTKAYMLDTQQMAETKYKKWE 767
            VAEKK+MEAPQESRGISKQKW+EERKKKIGKLLDANGLDMTKAYMLDTQ+ AE KYKKWE
Sbjct: 119  VAEKKKMEAPQESRGISKQKWLEERKKKIGKLLDANGLDMTKAYMLDTQEAAEVKYKKWE 178

Query: 768  KEPAPAGWDVFNQKTLYDAYKKRTKNINVDLEEYSKMKEADPEFYREASSLQYGKAPKVS 947
            K PAP GWDVFNQKTLY+AYKKRT NI VDLEEY+KMKE+DPEFYREASSLQYGKAPK+S
Sbjct: 179  KGPAPFGWDVFNQKTLYNAYKKRTMNIEVDLEEYNKMKESDPEFYREASSLQYGKAPKIS 238

Query: 948  EDKVERMVKELKDRDEKRNTFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGRYTLEIKN 1127
            E+KV+RMVKELKDR+EKRN+FSRRR+F EEKDIDSINDRNEHFNKKIERAFG+YTLEIKN
Sbjct: 239  EEKVDRMVKELKDREEKRNSFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYTLEIKN 298

Query: 1128 NLERGTALPD 1157
            NLERGTALPD
Sbjct: 299  NLERGTALPD 308


>emb|CAN77350.1| hypothetical protein VITISV_007542 [Vitis vinifera]
          Length = 295

 Score =  469 bits (1206), Expect = e-129
 Identities = 231/310 (74%), Positives = 257/310 (82%)
 Frame = +3

Query: 228  MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNEPAGLQASTRSFQQTSVAARV 407
            M   R VHPDC N+SNPYHEC EYCF+ IAEA     K E                    
Sbjct: 1    MAGERRVHPDCINASNPYHECVEYCFRKIAEAKAQMDKKESG---------------VPD 45

Query: 408  QTELPDNETSDPDDHPSGDGNNAIEDQPEVDFTKLTGKQRKLFELRLKMNEARKANQTAM 587
            Q + P +E +DP++    D +  +E+  EVDFT+LTG+Q+KLFELRLKMNEARKANQTAM
Sbjct: 46   QDKNPHDEGTDPEEQSDDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQTAM 105

Query: 588  VAEKKRMEAPQESRGISKQKWIEERKKKIGKLLDANGLDMTKAYMLDTQQMAETKYKKWE 767
            VAEKK+MEAP ESRGISKQKWIEERKKKIGKLLD NGLDM KAYMLDTQ+MAETKYKKWE
Sbjct: 106  VAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYKKWE 165

Query: 768  KEPAPAGWDVFNQKTLYDAYKKRTKNINVDLEEYSKMKEADPEFYREASSLQYGKAPKVS 947
            K+PAP GWDVFNQKTLY+AYKKRTKNI VD++EY+KMKEADPEFYREASSLQYGKAPK S
Sbjct: 166  KDPAPFGWDVFNQKTLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAPKCS 225

Query: 948  EDKVERMVKELKDRDEKRNTFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGRYTLEIKN 1127
            EDK+++MVKELKDRDEKR +FSRRR+FHEEKDIDSINDRNEHFNKKIERAFG+YTLEIKN
Sbjct: 226  EDKIDKMVKELKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKN 285

Query: 1128 NLERGTALPD 1157
            NLERGTALPD
Sbjct: 286  NLERGTALPD 295


>ref|XP_002279513.1| PREDICTED: pre-mRNA-splicing factor syf2 isoform 2 [Vitis vinifera]
          Length = 295

 Score =  466 bits (1198), Expect = e-129
 Identities = 230/310 (74%), Positives = 256/310 (82%)
 Frame = +3

Query: 228  MTEGRGVHPDCRNSSNPYHECSEYCFKVIAEAMKLASKNEPAGLQASTRSFQQTSVAARV 407
            M   R VHPDC N+SNPYHEC EYCF+ IAEA     K E                    
Sbjct: 1    MAGERRVHPDCINASNPYHECVEYCFRKIAEAKAQMDKKESG---------------VPD 45

Query: 408  QTELPDNETSDPDDHPSGDGNNAIEDQPEVDFTKLTGKQRKLFELRLKMNEARKANQTAM 587
            Q +   +E +DP++    D +  +E+  EVDFT+LTG+Q+KLFELRLKMNEARKANQTAM
Sbjct: 46   QDKNTHDEGTDPEERSDDDNDQPVEEIEEVDFTQLTGRQKKLFELRLKMNEARKANQTAM 105

Query: 588  VAEKKRMEAPQESRGISKQKWIEERKKKIGKLLDANGLDMTKAYMLDTQQMAETKYKKWE 767
            VAEKK+MEAP ESRGISKQKWIEERKKKIGKLLD NGLDM KAYMLDTQ+MAETKYKKWE
Sbjct: 106  VAEKKKMEAPPESRGISKQKWIEERKKKIGKLLDVNGLDMKKAYMLDTQEMAETKYKKWE 165

Query: 768  KEPAPAGWDVFNQKTLYDAYKKRTKNINVDLEEYSKMKEADPEFYREASSLQYGKAPKVS 947
            K+PAP GWDVFNQKTLY+AYKKRTKNI VD++EY+KMKEADPEFYREASSLQYGKAPK S
Sbjct: 166  KDPAPFGWDVFNQKTLYNAYKKRTKNIEVDIDEYNKMKEADPEFYREASSLQYGKAPKCS 225

Query: 948  EDKVERMVKELKDRDEKRNTFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGRYTLEIKN 1127
            EDK+++MVKELKDRDEKR +FSRRR+FHEEKDIDSINDRNEHFNKKIERAFG+YTLEIKN
Sbjct: 226  EDKIDKMVKELKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKN 285

Query: 1128 NLERGTALPD 1157
            NLERGTALPD
Sbjct: 286  NLERGTALPD 295


Top