BLASTX nr result

ID: Atractylodes22_contig00003796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003796
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   298   3e-78
emb|CBI23047.3| unnamed protein product [Vitis vinifera]              297   4e-78
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   290   4e-76
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   283   7e-74
ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|2...   277   4e-72

>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  298 bits (762), Expect = 3e-78
 Identities = 152/230 (66%), Positives = 177/230 (76%)
 Frame = -1

Query: 1101 MGDSYWKYAAAEGRXXXXXXXQPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVV 922
            M D+YW+Y  +          Q L  ++GKR RSDYDVP G +LPSYF+R+DERGT   +
Sbjct: 1    MADAYWRYGDSR-----QPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGM 55

Query: 921  KDSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAAT 742
            +D+D+IGASYDRYLR  Q  SYGG +S RP+S G+  R  ++ R++GMG   ++PA   T
Sbjct: 56   RDTDSIGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMG--SVEPAT--T 111

Query: 741  TKGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR 562
             K R  G  GGR E+ LPPDAS+TLFVEGLPSNC+RREVAHIFRPFVGYKEVRLV+KESR
Sbjct: 112  VKDRTLGYGGGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESR 171

Query: 561  HSSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 412
            H  GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSVSLRLQFARYP
Sbjct: 172  HPGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFARYP 221


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  297 bits (760), Expect = 4e-78
 Identities = 151/230 (65%), Positives = 174/230 (75%)
 Frame = -1

Query: 1101 MGDSYWKYAAAEGRXXXXXXXQPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVV 922
            M D YW+Y              P+  L  KRPRSDYDVPGG DLPSYF+REDER  H  +
Sbjct: 1    MADPYWRYGEVR-------QPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSI 53

Query: 921  KDSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAAT 742
            +DSD+IGASYDRYLR  Q PSYGG +S RP+S G+     ++ R++G+   G+D    AT
Sbjct: 54   RDSDSIGASYDRYLRNAQMPSYGG-DSGRPLSGGITSHPVDDPRVVGVR--GVDQG--AT 108

Query: 741  TKGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR 562
             K +  G  GGR E+ LPPDAS+TLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESR
Sbjct: 109  VKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESR 168

Query: 561  HSSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 412
            HS GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSV+LRLQFARYP
Sbjct: 169  HSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 218


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  290 bits (743), Expect = 4e-76
 Identities = 150/230 (65%), Positives = 173/230 (75%)
 Frame = -1

Query: 1101 MGDSYWKYAAAEGRXXXXXXXQPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVV 922
            M D YW+Y              P+  L  KRPRSDYDVPGG DLPSYF+REDER  H  +
Sbjct: 1    MADPYWRYGEVR-------QPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSI 53

Query: 921  KDSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAAT 742
            +DSD+IGASYDRYLR    PSYGG +S RP+S G+     ++ R++G+   G+D    AT
Sbjct: 54   RDSDSIGASYDRYLRNAM-PSYGG-DSGRPLSGGITSHPVDDPRVVGVR--GVDQG--AT 107

Query: 741  TKGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR 562
             K +  G  GGR E+ LPPDAS+TLFVEGLP+NC+RREV+HIFRPFVGYKEVRLV+KESR
Sbjct: 108  VKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESR 167

Query: 561  HSSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 412
            HS GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSV+LRLQFARYP
Sbjct: 168  HSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 217


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223545062|gb|EEF46575.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 232

 Score =  283 bits (724), Expect = 7e-74
 Identities = 146/230 (63%), Positives = 173/230 (75%)
 Frame = -1

Query: 1101 MGDSYWKYAAAEGRXXXXXXXQPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVV 922
            M D+YW+Y+ A          QP+  L+GKR RSDYDV  G +LP+Y+ R+D+RG    +
Sbjct: 1    MADAYWRYSDAR-----QPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAI 55

Query: 921  KDSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAAT 742
            +D+D+IGASYDRYLR     SY G +S RP+S G+  R+ ++ R+MG  +GGLDP    T
Sbjct: 56   RDTDSIGASYDRYLRSAPISSYSGGQSARPIS-GVPNRVADDPRIMG--IGGLDPG--PT 110

Query: 741  TKGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR 562
             K R  G+  GR E SLPPDA++TLFVEGLPS+CSRREVAHIFRPFVGYKEVRLV+KESR
Sbjct: 111  VKDRTLGLGSGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170

Query: 561  HSSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 412
               GDPLVLCFVDF SPA AATA DALQGYKFDEHDRDSV LRLQFARYP
Sbjct: 171  RPGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARYP 220


>ref|XP_002317797.1| predicted protein [Populus trichocarpa] gi|222858470|gb|EEE96017.1|
            predicted protein [Populus trichocarpa]
          Length = 233

 Score =  277 bits (709), Expect = 4e-72
 Identities = 144/230 (62%), Positives = 171/230 (74%)
 Frame = -1

Query: 1101 MGDSYWKYAAAEGRXXXXXXXQPLHPLIGKRPRSDYDVPGGGDLPSYFAREDERGTHLVV 922
            M DSYW+YA    +         +  L GKRPR DYD+P G DL SY++R+D+RG   V+
Sbjct: 1    MADSYWRYAGDSRQQPPQS----MSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVI 56

Query: 921  KDSDTIGASYDRYLRGTQFPSYGGIESVRPMSTGLGGRLHEESRMMGMGLGGLDPAVAAT 742
            +DSD+IGASYDRYLR     SYGG +S R MS G+     +++RM+ MG   +DP   A+
Sbjct: 57   RDSDSIGASYDRYLRSGTVSSYGGGQSARAMS-GVPSHPVDDTRMVSMG--PMDPG--AS 111

Query: 741  TKGRDAGMVGGRAEISLPPDASNTLFVEGLPSNCSRREVAHIFRPFVGYKEVRLVTKESR 562
             K R   M  GR+E+SLPPDAS+TLFVEGLPS+C+RREV+HIFRPFVGYKEVRLV+KESR
Sbjct: 112  VKDRSLRMGSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESR 171

Query: 561  HSSGDPLVLCFVDFESPAEAATAKDALQGYKFDEHDRDSVSLRLQFARYP 412
            H  GDPLVLCFVDF SPA AATA DALQGY+FDEHDRDS  LRLQFARYP
Sbjct: 172  HPGGDPLVLCFVDFLSPAHAATAMDALQGYRFDEHDRDSFHLRLQFARYP 221


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