BLASTX nr result

ID: Atractylodes22_contig00003749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003749
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]               64   1e-08
ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis t...    64   1e-08
ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-...    64   1e-08
gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa ...    64   1e-08
gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]      64   1e-08

>gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
          Length = 675

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 1   YFISAVCWKSDAPTMLTANSQGTIKVLVLAA 93
           YFISAVCWKSD+PTMLTANSQGTIKVLVLAA
Sbjct: 645 YFISAVCWKSDSPTMLTANSQGTIKVLVLAA 675


>ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
           gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3
           ubiquitin-protein ligase COP1; AltName:
           Full=Constitutive photomorphogenesis protein 1
           gi|2702280|gb|AAB91983.1| COP1 regulatory protein
           [Arabidopsis thaliana] gi|95147316|gb|ABF57293.1|
           At2g32950 [Arabidopsis thaliana]
           gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase
           COP1 [Arabidopsis thaliana]
          Length = 675

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 1   YFISAVCWKSDAPTMLTANSQGTIKVLVLAA 93
           YFISAVCWKSD+PTMLTANSQGTIKVLVLAA
Sbjct: 645 YFISAVCWKSDSPTMLTANSQGTIKVLVLAA 675


>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 687

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 1   YFISAVCWKSDAPTMLTANSQGTIKVLVLAA 93
           YFISAVCWKSD+PTMLTANSQGTIKVLVLAA
Sbjct: 657 YFISAVCWKSDSPTMLTANSQGTIKVLVLAA 687


>gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
          Length = 677

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 1   YFISAVCWKSDAPTMLTANSQGTIKVLVLAA 93
           YFISAVCWKSD+PTMLTANSQGTIKVLVLAA
Sbjct: 647 YFISAVCWKSDSPTMLTANSQGTIKVLVLAA 677


>gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
          Length = 677

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +1

Query: 1   YFISAVCWKSDAPTMLTANSQGTIKVLVLAA 93
           YFISAVCWKSD+PTMLTANSQGTIKVLVLAA
Sbjct: 647 YFISAVCWKSDSPTMLTANSQGTIKVLVLAA 677


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