BLASTX nr result

ID: Atractylodes22_contig00003731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003731
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47540.1| unknown [Medicago truncatula]                          138   8e-31
ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   137   1e-30
ref|XP_004145533.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   137   2e-30
ref|XP_002510641.1| conserved hypothetical protein [Ricinus comm...   136   3e-30
gb|AFK49070.1| unknown [Lotus japonicus]                              135   5e-30

>gb|AFK47540.1| unknown [Medicago truncatula]
          Length = 69

 Score =  138 bits (348), Expect = 8e-31
 Identities = 57/69 (82%), Positives = 63/69 (91%), Gaps = 4/69 (5%)
 Frame = +2

Query: 113 MAGGHGHG---TTYKGVTLHQPKRWHTITGKGMCAMMWFWILYRAKQDGPVVLGWRHPWE 283
           M GGHGHG   TTYKGVT+HQPKRWHT+TGKG+CA+MWFW++YRAKQD PVVLGWRHPWE
Sbjct: 1   MGGGHGHGHGGTTYKGVTIHQPKRWHTVTGKGLCAVMWFWVMYRAKQDAPVVLGWRHPWE 60

Query: 284 GHG-HGDEH 307
           GHG HGDEH
Sbjct: 61  GHGDHGDEH 69


>ref|XP_002285922.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2-like [Vitis vinifera]
          Length = 69

 Score =  137 bits (346), Expect = 1e-30
 Identities = 55/66 (83%), Positives = 60/66 (90%), Gaps = 3/66 (4%)
 Frame = +2

Query: 119 GGHGHGTTYKGVTLHQPKRWHTITGKGMCAMMWFWILYRAKQDGPVVLGWRHPWEG---H 289
           GGHGH TTYKGVT+H PKRWHTITGKG+CA+MWFW++YRAKQDGPVVLGWRHPWEG   H
Sbjct: 4   GGHGHSTTYKGVTMHHPKRWHTITGKGLCAIMWFWVMYRAKQDGPVVLGWRHPWEGHDEH 63

Query: 290 GHGDEH 307
           GHGD H
Sbjct: 64  GHGDHH 69


>ref|XP_004145533.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 2-like isoform 1 [Cucumis sativus]
           gi|449455587|ref|XP_004145534.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           2-like isoform 2 [Cucumis sativus]
           gi|449485133|ref|XP_004157078.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           2-like isoform 1 [Cucumis sativus]
           gi|449485137|ref|XP_004157079.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           2-like isoform 2 [Cucumis sativus]
          Length = 69

 Score =  137 bits (344), Expect = 2e-30
 Identities = 53/61 (86%), Positives = 59/61 (96%)
 Frame = +2

Query: 119 GGHGHGTTYKGVTLHQPKRWHTITGKGMCAMMWFWILYRAKQDGPVVLGWRHPWEGHGHG 298
           GGHG GTT+KGVT+H PKRWHT+TGKG+CA+MWFW+LYRAKQDGPVVLGWRHPWEGHGHG
Sbjct: 4   GGHGAGTTFKGVTIHPPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHGHG 63

Query: 299 D 301
           D
Sbjct: 64  D 64


>ref|XP_002510641.1| conserved hypothetical protein [Ricinus communis]
           gi|223551342|gb|EEF52828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score =  136 bits (343), Expect = 3e-30
 Identities = 57/69 (82%), Positives = 61/69 (88%), Gaps = 4/69 (5%)
 Frame = +2

Query: 113 MAGGHGHGTTYKGVTLHQPKRWHTITGKGMCAMMWFWILYRAKQDGPVVLGWRHPWEGHG 292
           M GGHG G TYKGVT+HQPKRWH+ITGKG+CA+MWFWILYRAKQDGPVVLGWRHPWEGHG
Sbjct: 1   MGGGHGEGYTYKGVTIHQPKRWHSITGKGLCAVMWFWILYRAKQDGPVVLGWRHPWEGHG 60

Query: 293 ----HGDEH 307
               HG EH
Sbjct: 61  DHGSHGHEH 69


>gb|AFK49070.1| unknown [Lotus japonicus]
          Length = 66

 Score =  135 bits (341), Expect = 5e-30
 Identities = 55/66 (83%), Positives = 60/66 (90%), Gaps = 1/66 (1%)
 Frame = +2

Query: 113 MAGGHGHGTTYKGVTLHQPKRWHTITGKGMCAMMWFWILYRAKQDGPVVLGWRHPWEGHG 292
           M GGHG GTTYKGVT+H PKRWH +TGKG+CA+MWFW+LYRAKQDGPVVLGWRHPWEGHG
Sbjct: 1   MGGGHGGGTTYKGVTVHTPKRWHAVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHG 60

Query: 293 -HGDEH 307
            HGD H
Sbjct: 61  DHGDGH 66


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