BLASTX nr result

ID: Atractylodes22_contig00003726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003726
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   214   3e-53
ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a...   211   3e-52
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   207   4e-51
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...   207   4e-51
ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|2...   206   9e-51

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  214 bits (546), Expect = 3e-53
 Identities = 112/159 (70%), Positives = 117/159 (73%)
 Frame = +2

Query: 128 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 307
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG KKNEERE+RRTL
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKNEEREERRTL 68

Query: 308 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXXIPTAPLIQAQXXXX 487
           GLVLLRGEEVISMTVEGPPPP+E+                      IPTAPLIQAQ    
Sbjct: 69  GLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLA 128

Query: 488 XXXXXXXXXXXXMMQPQISRPPVPNMSAPPMNYPQAPVI 604
                       MMQPQISRPPVP +SAPPM YP APVI
Sbjct: 129 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVI 167


>ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
           B'-like [Cucumis sativus]
           gi|449490639|ref|XP_004158663.1| PREDICTED: small
           nuclear ribonucleoprotein-associated protein B'-like
           [Cucumis sativus]
          Length = 284

 Score =  211 bits (538), Expect = 3e-52
 Identities = 107/159 (67%), Positives = 115/159 (72%)
 Frame = +2

Query: 128 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 307
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEER++RRTL
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEERDERRTL 69

Query: 308 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXXIPTAPLIQAQXXXX 487
           GLVLLRGEEVISMTVEGPPP +E+                      IPTAPL+QAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLVQAQPGLA 129

Query: 488 XXXXXXXXXXXXMMQPQISRPPVPNMSAPPMNYPQAPVI 604
                       MMQPQISRPPVP +SAPPM YP AP+I
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPII 168


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530625|gb|EEF32501.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  207 bits (528), Expect = 4e-51
 Identities = 109/159 (68%), Positives = 115/159 (72%)
 Frame = +2

Query: 128 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 307
           LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEEREDRRTL
Sbjct: 10  LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 308 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXXIPTAPLIQAQXXXX 487
           GLVLLRGEEVISMTVEGPPP +E+                      IPTAPLIQAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 488 XXXXXXXXXXXXMMQPQISRPPVPNMSAPPMNYPQAPVI 604
                       MMQPQISRPPVP +SAPPM+YP  PVI
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYP-PPVI 167


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis] gi|223530623|gb|EEF32499.1| small
           nuclear ribonucleoprotein-associated protein, putative
           [Ricinus communis]
          Length = 275

 Score =  207 bits (528), Expect = 4e-51
 Identities = 109/159 (68%), Positives = 115/159 (72%)
 Frame = +2

Query: 128 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 307
           LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEEREDRRTL
Sbjct: 10  LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 308 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXXIPTAPLIQAQXXXX 487
           GLVLLRGEEVISMTVEGPPP +E+                      IPTAPLIQAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 488 XXXXXXXXXXXXMMQPQISRPPVPNMSAPPMNYPQAPVI 604
                       MMQPQISRPPVP +SAPPM+YP  PVI
Sbjct: 130 GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYP-PPVI 167


>ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|222875306|gb|EEF12437.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  206 bits (525), Expect = 9e-51
 Identities = 106/154 (68%), Positives = 109/154 (70%)
 Frame = +2

Query: 128 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 307
           LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEEREDRRTL
Sbjct: 10  LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 308 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXXIPTAPLIQAQXXXX 487
           GLVLLRGEEVISMTVEGPPPP+E+                      IPTAPLIQAQ    
Sbjct: 70  GLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAPLIQAQPGLA 129

Query: 488 XXXXXXXXXXXXMMQPQISRPPVPNMSAPPMNYP 589
                       MMQPQ  RPPVP  SAPPM YP
Sbjct: 130 GPVRGVGGPSPGMMQPQFMRPPVPQHSAPPMTYP 163


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