BLASTX nr result
ID: Atractylodes22_contig00003718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00003718
(1861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 926 0.0
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 926 0.0
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 917 0.0
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2... 915 0.0
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub... 911 0.0
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 926 bits (2394), Expect = 0.0
Identities = 445/548 (81%), Positives = 495/548 (90%), Gaps = 1/548 (0%)
Frame = +2
Query: 2 VQNLHKIETLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWDIKYLFLESDGHDPTKYTH 181
VQNLHKIE KGG +FQ LLD G++E +G EEEEDC TAW IK+L DG KYTH
Sbjct: 657 VQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTH 716
Query: 182 CELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAVGYSCTNPDSRVDKLSHQLFYP 361
CELDMSF+LGLSCGIIPFANHDHA+RVL+Q+QKHSQQA+G+ TNP+ RVD LSHQL+YP
Sbjct: 717 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYP 776
Query: 362 QRPLFRTMLSDCLEKPGQ-ESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASL 538
QRPLFRT+ SDCL KPG ++P+PE YNGQ AIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 777 QRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASL 836
Query: 539 DRGMFRSEHIRSYKAEVDNKEAAGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGAN 718
+RGMFRSEHIRSYKA+VDNKE K+ K DD VNFGKI SKIGRVDSLDDDGFPFIGAN
Sbjct: 837 ERGMFRSEHIRSYKADVDNKELLDKRRKY-DDNVNFGKIPSKIGRVDSLDDDGFPFIGAN 895
Query: 719 LQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDK 898
LQSGDIVIG+ ESG DHS+KLKHTERGMVQKVVLS+NDEGKNFAVVSLRQVRSPCLGDK
Sbjct: 896 LQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDK 955
Query: 899 FSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPSRQTPGQMLESALGKGIALGG 1078
FSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPH+FPSRQTPGQ+LE+ALGKGIA GG
Sbjct: 956 FSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGG 1015
Query: 1079 SQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGEIVKSLVFMGPTFYQRLVHMS 1258
S +YATPFS+LS++AIT+QLHRAGFSRWGNER+Y+GRTGE+V+SL+FMGPTFYQRL+HM+
Sbjct: 1016 SMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMA 1075
Query: 1259 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSN 1438
EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD S
Sbjct: 1076 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQ 1135
Query: 1439 MHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIKVNVPYGAKLLTQELFSMGIS 1618
MH+C+KCK +A++IQR+VPGG KIRGPYCRVCESV++++KVNVPYGAKLL QELFSMGIS
Sbjct: 1136 MHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGIS 1195
Query: 1619 LKFDTELC 1642
LKF+T LC
Sbjct: 1196 LKFETRLC 1203
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 926 bits (2394), Expect = 0.0
Identities = 441/547 (80%), Positives = 500/547 (91%), Gaps = 1/547 (0%)
Frame = +2
Query: 2 VQNLHKIETLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWDIKYLFLESDGHDPTKYTH 181
V+NL KI+ KGG YSFQ LLD GV+E IG EEEEDCRTAW I YLF+E++ KYTH
Sbjct: 473 VENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFMENEAKATVKYTH 532
Query: 182 CELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAVGYSCTNPDSRVDKLSHQLFYP 361
CELDMSF+LGLS IIPFANHDHA+RVL+QS+KHSQQA+G++ TNP+ RVD +HQL+YP
Sbjct: 533 CELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIRVDTNTHQLYYP 592
Query: 362 QRPLFRTMLSDCLEKPGQE-SLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASL 538
QRPLFRTM+SDCL KPG ++PR E++NGQCAIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 593 QRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQEDSLVMNRASL 652
Query: 539 DRGMFRSEHIRSYKAEVDNKEAAGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGAN 718
+RGMFRSEHIRSYKA+VDNKE+ GKK K +D+VNFGK+QSKIGRVDSLDDDGFPFIGAN
Sbjct: 653 ERGMFRSEHIRSYKADVDNKESVGKKPKF-EDSVNFGKVQSKIGRVDSLDDDGFPFIGAN 711
Query: 719 LQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDK 898
LQ+GDIV+G+ ESG+DHS+KLKHTERGMVQKVVLSANDEGKNFAVVSLRQVR+PCLGDK
Sbjct: 712 LQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRTPCLGDK 771
Query: 899 FSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPSRQTPGQMLESALGKGIALGG 1078
FSSMHGQKGVLG+LESQENFPFT+QGIVPDIV+NPHAFPSRQTPGQ+LE+ALGKGIA GG
Sbjct: 772 FSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEAALGKGIACGG 831
Query: 1079 SQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGEIVKSLVFMGPTFYQRLVHMS 1258
Q+YATPFS+LS+DA+TDQLHRAGFSRWG+ER+Y+GRTGE++ SLVFMGPTFYQRL HMS
Sbjct: 832 LQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGPTFYQRLTHMS 891
Query: 1259 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSN 1438
EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD S
Sbjct: 892 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQ 951
Query: 1439 MHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIKVNVPYGAKLLTQELFSMGIS 1618
MH+CRKC +A++IQR+VPGG KIRGPYCR CESVE++++VNVPYGAKLL QELFSMGI+
Sbjct: 952 MHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGIT 1011
Query: 1619 LKFDTEL 1639
+KFDTEL
Sbjct: 1012 MKFDTEL 1018
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 917 bits (2369), Expect = 0.0
Identities = 439/550 (79%), Positives = 503/550 (91%), Gaps = 3/550 (0%)
Frame = +2
Query: 2 VQNLHKIETLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWDIKYLFLESDGHD--PTKY 175
V+NL K++T KG ++FQ LLD G+VELIG EEEEDC TAW IKYL GHD P KY
Sbjct: 653 VENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLL---KGHDDPPVKY 709
Query: 176 THCELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAVGYSCTNPDSRVDKLSHQLF 355
THCELDMSF+LGLSCGIIP+ANHDHA+RVL+QS+KHSQQA+G+S TNP+ RVD LSHQL+
Sbjct: 710 THCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLY 769
Query: 356 YPQRPLFRTMLSDCLEKPG-QESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRA 532
YPQRPLFRTM+SDCL KPG E K ++PRPE++NGQ AIVAVNVHLGYNQEDSLVMNRA
Sbjct: 770 YPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRA 829
Query: 533 SLDRGMFRSEHIRSYKAEVDNKEAAGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIG 712
SL+RGMFRSEHIRSYK+EVDN E+ KK KS +D+V+FGK+QSKIGRVDSLDDDGFPFIG
Sbjct: 830 SLERGMFRSEHIRSYKSEVDNNESLDKKRKS-EDSVHFGKMQSKIGRVDSLDDDGFPFIG 888
Query: 713 ANLQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSPCLG 892
ANLQ+GDIVIG+ ESG DHS+KLKHTERGMVQKVV+SAND+GKNFAVVSLRQVR+PCLG
Sbjct: 889 ANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLG 948
Query: 893 DKFSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPSRQTPGQMLESALGKGIAL 1072
DKFSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINPHAFPSRQTPGQ+LE+ALGKGIA
Sbjct: 949 DKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAC 1008
Query: 1073 GGSQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGEIVKSLVFMGPTFYQRLVH 1252
GG R+ATPFS+LS+DAI DQLHRAGFSRWG+ER+Y+GRTGE+++SL+FMGPTFYQRL+H
Sbjct: 1009 GGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIH 1068
Query: 1253 MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDC 1432
M+EDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHERLFTLSD
Sbjct: 1069 MAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 1128
Query: 1433 SNMHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIKVNVPYGAKLLTQELFSMG 1612
+ MH+CR+CK ++++IQRSV GG K+RGPYCR CES E+++KVNVPYGAKLL QELFSMG
Sbjct: 1129 AYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMG 1188
Query: 1613 ISLKFDTELC 1642
ISLKF+T+LC
Sbjct: 1189 ISLKFETQLC 1198
>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
predicted protein [Populus trichocarpa]
Length = 1160
Score = 915 bits (2365), Expect = 0.0
Identities = 441/546 (80%), Positives = 493/546 (90%)
Frame = +2
Query: 2 VQNLHKIETLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWDIKYLFLESDGHDPTKYTH 181
V+NL KI+ KGG Y F LLD G++E IG EEEEDC TAW IK+L + +G P KY+H
Sbjct: 625 VENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYSH 684
Query: 182 CELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAVGYSCTNPDSRVDKLSHQLFYP 361
CELDMSF+LGLSCGIIPFANHDHA+RVL+Q+QKHSQQA+G+S TNP+ RVD LSHQL YP
Sbjct: 685 CELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHQLHYP 744
Query: 362 QRPLFRTMLSDCLEKPGQESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASLD 541
QRPLFRTM+SDCL ++P+PE +NGQ AIVAVNVHLGYNQEDSLVMNRASL+
Sbjct: 745 QRPLFRTMISDCL----------VLPKPELFNGQNAIVAVNVHLGYNQEDSLVMNRASLE 794
Query: 542 RGMFRSEHIRSYKAEVDNKEAAGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGANL 721
RGMFRSEHIRSYKAEVDNKE K+ KS +D++ FGKIQSKIGRVDSLDDDGFPFIGAN+
Sbjct: 795 RGMFRSEHIRSYKAEVDNKELTDKRRKS-EDSITFGKIQSKIGRVDSLDDDGFPFIGANM 853
Query: 722 QSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDKF 901
QSGDIVIGK ESG+DHSVKLKHTERGMVQKVVLS+NDEGKNFAVVSLRQVRSPCLGDKF
Sbjct: 854 QSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKF 913
Query: 902 SSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPSRQTPGQMLESALGKGIALGGS 1081
SSMHGQKGVLG+LESQENFPFT+QG+VPDIVINPHAFPSRQTPGQ+LE+ALGKGIA GGS
Sbjct: 914 SSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGS 973
Query: 1082 QRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGEIVKSLVFMGPTFYQRLVHMSE 1261
+RYATPFS+LS+D I DQLHRA FSRWGNER+Y+GRTGE+V+SL+FMGPTFYQRLVHM+E
Sbjct: 974 KRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMAE 1033
Query: 1262 DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSNM 1441
DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD S M
Sbjct: 1034 DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSEM 1093
Query: 1442 HVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIKVNVPYGAKLLTQELFSMGISL 1621
H+C+KCK +A++IQR VPGG KIRGPYCRVCESV+D++KV+VPYGAKLL QELFSMGISL
Sbjct: 1094 HICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGISL 1153
Query: 1622 KFDTEL 1639
KFDT +
Sbjct: 1154 KFDTRV 1159
>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
sativus]
Length = 1197
Score = 911 bits (2354), Expect = 0.0
Identities = 439/548 (80%), Positives = 501/548 (91%), Gaps = 1/548 (0%)
Frame = +2
Query: 2 VQNLHKIETLKGGGYSFQDLLDNGVVELIGPEEEEDCRTAWDIKYLFLESDGHDPTKYTH 181
V+NL++I+ KG Y+FQ LLD G++ELIG EEEEDCR AW IK+L +E +G TKY+H
Sbjct: 654 VENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHL-MEDEG--TTKYSH 710
Query: 182 CELDMSFMLGLSCGIIPFANHDHAKRVLFQSQKHSQQAVGYSCTNPDSRVDKLSHQLFYP 361
CELDMSF+LGLSCG++PFANHDHA+R LFQSQKHS QA+G+S TN + RVD LSHQL YP
Sbjct: 711 CELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQLHYP 770
Query: 362 QRPLFRTMLSDCLEKPGQ-ESLKRMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASL 538
QRPLFRTM +DCL PG S ++P+PEFYNGQ AIVAVNVHLGYNQEDSLVMNRASL
Sbjct: 771 QRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASL 830
Query: 539 DRGMFRSEHIRSYKAEVDNKEAAGKKIKSSDDAVNFGKIQSKIGRVDSLDDDGFPFIGAN 718
+RGMFRSEHIRSYKAEVDNKE++ K+ KS DDA+NFGK QSKIGRVDSLDDDGFP+IGAN
Sbjct: 831 ERGMFRSEHIRSYKAEVDNKESSEKRRKS-DDAINFGKTQSKIGRVDSLDDDGFPYIGAN 889
Query: 719 LQSGDIVIGKYTESGSDHSVKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRSPCLGDK 898
LQSGDIVIG+ ESG+DHS+KLKHTE+GMVQKVVLS+ND+GKN+AVVSLRQVRSPCLGDK
Sbjct: 890 LQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDK 949
Query: 899 FSSMHGQKGVLGYLESQENFPFTLQGIVPDIVINPHAFPSRQTPGQMLESALGKGIALGG 1078
FSSMHGQKGVLG+LESQENFPFT+QGIVPDIVINPHAFPSRQTPGQ+LE+ALGKGIA GG
Sbjct: 950 FSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGG 1009
Query: 1079 SQRYATPFSSLSIDAITDQLHRAGFSRWGNERLYDGRTGEIVKSLVFMGPTFYQRLVHMS 1258
S +YATPFS+ S+DAITDQLHRAGFSRWG+ER+Y+GRTGE+++SL+FMGPTFYQRL+HM+
Sbjct: 1010 SLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMA 1069
Query: 1259 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSN 1438
EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD S
Sbjct: 1070 EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQ 1129
Query: 1439 MHVCRKCKRMASIIQRSVPGGSKIRGPYCRVCESVEDVIKVNVPYGAKLLTQELFSMGIS 1618
MHVC+KCK +AS+IQRSV GG K+RGPYCRVCES +D+++VNVPYGAKLL QELFSMGI+
Sbjct: 1130 MHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGIN 1189
Query: 1619 LKFDTELC 1642
LKF+T+LC
Sbjct: 1190 LKFETQLC 1197