BLASTX nr result

ID: Atractylodes22_contig00003671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003671
         (1274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       258   3e-66
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]       255   2e-65
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       254   3e-65
ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi...   234   3e-59
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   233   1e-58

>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  258 bits (658), Expect = 3e-66
 Identities = 153/303 (50%), Positives = 177/303 (58%), Gaps = 1/303 (0%)
 Frame = -1

Query: 1157 MEFWGVEVKSGQPLEVNLGEGKVLHLSQACLGEIKKDKSNESVCLHITVEEKKLVLGTLH 978
            MEFWG EVKSGQPL V  G+  VLHLSQA LGE KKDK +E VCL + V+ KKL LGTL+
Sbjct: 1    MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 977  PERLPQQLFDLVFDKDFQLSHNWKNGSVYFYGYKADQPTXXXXXXXXXXXXXXXDVLQLP 798
             ++LPQQ FDLVFD+DF+LSHNWKNGSVYF+GYKA  P                + + L 
Sbjct: 61   LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANP-----YEQEEDEDESDEEIPLT 115

Query: 797  IPN-GKQEAKKEEKPVVXXXXXXXXXXXXXXXXXXKIVEPEKDVKPXXXXXXXXXXXXXX 621
            + N GK EAK                         KI EP KD K               
Sbjct: 116  LANTGKSEAKASAN------------DSASGKQKVKIAEPSKDAK------ADDEDDSSD 157

Query: 620  XXXXXXXXXXXXXXXXXXXXXXXXXXXETPKKQQSGKKRPNESAIKTPGTDKKAKLATTP 441
                                       ETPKK +  KKRP++SAIKTP  DKKAK A TP
Sbjct: 158  EDDTSEDEEDSEMGEDEDDSDEDQSDEETPKKAEPSKKRPSDSAIKTPAPDKKAKFA-TP 216

Query: 440  QKTEGKKGAVHVATPHPSKQAGKTPGNKSNQKSPASEGEHSCKSCNRNFKSENALQSHNQ 261
            QKT+GKKGAVHVATPHPSKQAGKT GNKSNQ +P S G  +CK+C+R F SE AL+SH++
Sbjct: 217  QKTDGKKGAVHVATPHPSKQAGKTSGNKSNQ-TPKSGGSLACKTCSRTFGSETALESHSK 275

Query: 260  AKH 252
            AKH
Sbjct: 276  AKH 278


>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score =  255 bits (651), Expect = 2e-65
 Identities = 151/302 (50%), Positives = 178/302 (58%)
 Frame = -1

Query: 1157 MEFWGVEVKSGQPLEVNLGEGKVLHLSQACLGEIKKDKSNESVCLHITVEEKKLVLGTLH 978
            MEFWG EVKSG+PL V  G+G VLHLSQA LGE+KKDK  +SVCL + ++ KKLVLGTL+
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKV-QSVCLSVNIDGKKLVLGTLN 59

Query: 977  PERLPQQLFDLVFDKDFQLSHNWKNGSVYFYGYKADQPTXXXXXXXXXXXXXXXDVLQLP 798
             +++PQQ FDLVFD+DF+LSHNWKNGSVYF+GYKA  P                D+    
Sbjct: 60   SDKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTI 119

Query: 797  IPNGKQEAKKEEKPVVXXXXXXXXXXXXXXXXXXKIVEPEKDVKPXXXXXXXXXXXXXXX 618
              NGK EAK +E                      KIVEP KD K                
Sbjct: 120  ANNGKPEAKVKE-----AEKSNAAKDSASGKQKVKIVEPSKDAK---ADDEDESTDEDEM 171

Query: 617  XXXXXXXXXXXXXXXXXXXXXXXXXXETPKKQQSGKKRPNESAIKTPGTDKKAKLATTPQ 438
                                      ETPKK + GKKR  +SA KTP  DKKAK   TPQ
Sbjct: 172  SEDEDSDVGEGEDESDEDDESDESEEETPKKAEPGKKRKADSATKTP-ADKKAKF-VTPQ 229

Query: 437  KTEGKKGAVHVATPHPSKQAGKTPGNKSNQKSPASEGEHSCKSCNRNFKSENALQSHNQA 258
            KT+GKKG+ HVATPHPSKQAGK+P NK NQ++P S G H CK+CNR F SENAL+SH++A
Sbjct: 230  KTDGKKGSGHVATPHPSKQAGKSPANK-NQQTPKSGGAHLCKTCNRGFGSENALESHSKA 288

Query: 257  KH 252
            KH
Sbjct: 289  KH 290


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  254 bits (649), Expect = 3e-65
 Identities = 149/302 (49%), Positives = 177/302 (58%)
 Frame = -1

Query: 1157 MEFWGVEVKSGQPLEVNLGEGKVLHLSQACLGEIKKDKSNESVCLHITVEEKKLVLGTLH 978
            MEFWG EVKSG+PL V  G+G VLHLSQA LGE+KKDK+ +SVCL + ++ KKLVLGTL 
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59

Query: 977  PERLPQQLFDLVFDKDFQLSHNWKNGSVYFYGYKADQPTXXXXXXXXXXXXXXXDVLQLP 798
             +++PQQ FDLVFD+DF+LSHNWK+GSVYF+GYKA  P                D+    
Sbjct: 60   SDKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTI 119

Query: 797  IPNGKQEAKKEEKPVVXXXXXXXXXXXXXXXXXXKIVEPEKDVKPXXXXXXXXXXXXXXX 618
              NGK EAK +E                      KIVEP KD K                
Sbjct: 120  ANNGKPEAKVKE-----AEKSNVAKDSASGKQKVKIVEPSKDAK---ADDEDESTDEDEM 171

Query: 617  XXXXXXXXXXXXXXXXXXXXXXXXXXETPKKQQSGKKRPNESAIKTPGTDKKAKLATTPQ 438
                                      ETPKK + GKKR  +SA KTP  DKKAK   TPQ
Sbjct: 172  SEDEDSDMGEGEDESDGDDESDEGEEETPKKAEPGKKRKADSATKTPVPDKKAKF-VTPQ 230

Query: 437  KTEGKKGAVHVATPHPSKQAGKTPGNKSNQKSPASEGEHSCKSCNRNFKSENALQSHNQA 258
            KT+GKKG+ HVATPHPSKQAGK+P NK NQ++P S G H CK+CNR F SENAL+ H++A
Sbjct: 231  KTDGKKGSGHVATPHPSKQAGKSPANK-NQQTPKSGGAHLCKTCNRGFGSENALEFHSKA 289

Query: 257  KH 252
            KH
Sbjct: 290  KH 291


>ref|XP_002326411.1| histone deacetylase [Populus trichocarpa] gi|222833604|gb|EEE72081.1|
            histone deacetylase [Populus trichocarpa]
          Length = 271

 Score =  234 bits (598), Expect = 3e-59
 Identities = 141/302 (46%), Positives = 169/302 (55%)
 Frame = -1

Query: 1157 MEFWGVEVKSGQPLEVNLGEGKVLHLSQACLGEIKKDKSNESVCLHITVEEKKLVLGTLH 978
            MEFWGVEVK G+PL V  G+G +LHLSQACLGE KKDK NESVCL +  +++KLVLGTL 
Sbjct: 1    MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60

Query: 977  PERLPQQLFDLVFDKDFQLSHNWKNGSVYFYGYKADQPTXXXXXXXXXXXXXXXDVLQLP 798
             E++PQ  FDLVF+KDF+LSHN KNGSV+F GYK  QP                  L +P
Sbjct: 61   HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQPEYPFTQINFISDGEED--LPVP 118

Query: 797  IPNGKQEAKKEEKPVVXXXXXXXXXXXXXXXXXXKIVEPEKDVKPXXXXXXXXXXXXXXX 618
            + NGK+EA K+ KP                    KIVEP KD KP               
Sbjct: 119  VDNGKEEA-KQPKP------ENENAAKPDSKQKVKIVEPNKDGKP--------------- 156

Query: 617  XXXXXXXXXXXXXXXXXXXXXXXXXXETPKKQQSGKKRPNESAIKTPGTDKKAKLATTPQ 438
                                       +  + + GKKR  ESA K P  DKKAK   TPQ
Sbjct: 157  -------KPENDDSSDEEDDSSDDGESSDDQAEVGKKRSAESASKNPVPDKKAKF-VTPQ 208

Query: 437  KTEGKKGAVHVATPHPSKQAGKTPGNKSNQKSPASEGEHSCKSCNRNFKSENALQSHNQA 258
            KT+ KK  VH+ATPHPSKQA KT  N  +Q+   ++   SC SCNR+F SENALQSH++A
Sbjct: 209  KTDLKKAGVHIATPHPSKQAAKTSAN--SQRKEQAQKSFSCNSCNRSFGSENALQSHSKA 266

Query: 257  KH 252
            KH
Sbjct: 267  KH 268


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
            deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
            gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
            chacoense]
          Length = 269

 Score =  233 bits (593), Expect = 1e-58
 Identities = 143/302 (47%), Positives = 167/302 (55%)
 Frame = -1

Query: 1157 MEFWGVEVKSGQPLEVNLGEGKVLHLSQACLGEIKKDKSNESVCLHITVEEKKLVLGTLH 978
            MEFWG EVKSG+PL V  G+G VLHLSQA LGE+KKDKS ESVCL + ++ KKLVLGTL+
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKS-ESVCLSVNIDGKKLVLGTLN 59

Query: 977  PERLPQQLFDLVFDKDFQLSHNWKNGSVYFYGYKADQPTXXXXXXXXXXXXXXXDVLQLP 798
             E++PQQ FDLVFD+DF+LSHN K+GSVYF+GYKA  P                D+    
Sbjct: 60   SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTL 119

Query: 797  IPNGKQEAKKEEKPVVXXXXXXXXXXXXXXXXXXKIVEPEKDVKPXXXXXXXXXXXXXXX 618
              +GK E K+  K                     +IVEP KD                  
Sbjct: 120  ANSGKPEPKEAGK-------SNAGKDSASGKQKVRIVEPTKD------------------ 154

Query: 617  XXXXXXXXXXXXXXXXXXXXXXXXXXETPKKQQSGKKRPNESAIKTPGTDKKAKLATTPQ 438
                                      ETPKK +  K+R  +SA KTP TDKKAKL TTPQ
Sbjct: 155  -DEDESSDDDDSDMGEDEDDSDDSEEETPKKAEPAKRRKADSATKTPVTDKKAKL-TTPQ 212

Query: 437  KTEGKKGAVHVATPHPSKQAGKTPGNKSNQKSPASEGEHSCKSCNRNFKSENALQSHNQA 258
            KT+GKKG  HVATPHPSKQA KT         P S G H CK CNR+F SE AL SH++A
Sbjct: 213  KTDGKKGGGHVATPHPSKQASKT---------PKSAGSHHCKPCNRSFGSEGALDSHSKA 263

Query: 257  KH 252
            KH
Sbjct: 264  KH 265


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