BLASTX nr result

ID: Atractylodes22_contig00003667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003667
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]    142   2e-31
ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   140   6e-31
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30
ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788...   135   2e-29
ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820...   135   2e-29

>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score =  142 bits (358), Expect = 2e-31
 Identities = 74/123 (60%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
 Frame = -2

Query: 651 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFFGRIAMLIDQNAQAFHMFMSALLQLFDRS 472
           DQD             FW+S M VMQG VTFFGR+AMLIDQN QAFHM MSA+LQLFDRS
Sbjct: 175 DQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFDRS 234

Query: 471 GLLYGELARFVLRILGVRTKPNKVQXXXXXXXXXXPAQ------IEGPKAAPAGAWDGVW 310
           G+LYGELARFVLR+LGV+TKPNKV                    IEGPKAAP+  WD VW
Sbjct: 235 GMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHGNQNFIEGPKAAPSAGWDNVW 294

Query: 309 GNN 301
           G+N
Sbjct: 295 GDN 297



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -2

Query: 1065 VEASGTAKPGEIVSTNDATSAMNRNTLGRPVPSRPWEQQQ 946
            VEASGTA+PGEIVST +  + +N +TL RPVP RPWEQQQ
Sbjct: 42   VEASGTARPGEIVSTANRNTTVNNSTLARPVPPRPWEQQQ 81


>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  140 bits (354), Expect = 6e-31
 Identities = 72/123 (58%), Positives = 83/123 (67%), Gaps = 6/123 (4%)
 Frame = -2

Query: 651 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFFGRIAMLIDQNAQAFHMFMSALLQLFDRS 472
           DQD             FWIS +RVMQG V FFGRI++LIDQN QAFHMFM+A+LQLFDR+
Sbjct: 188 DQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLFDRT 247

Query: 471 GLLYGELARFVLRILGVRTKPNKVQ------XXXXXXXXXXPAQIEGPKAAPAGAWDGVW 310
           GLLYGELARFVLR+LG++TKP KVQ                   IEGPK AP+G WD VW
Sbjct: 248 GLLYGELARFVLRLLGIKTKPRKVQGPGPDGLPAPHNPHGNQNYIEGPKGAPSGGWDNVW 307

Query: 309 GNN 301
           G+N
Sbjct: 308 GDN 310



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 29/40 (72%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -2

Query: 1065 VEASGTAKPGEIVSTNDATSAMNR-NTLGRPVPSRPWEQQ 949
            VEASGTA+PGEIV   + T+A+N  NTLGRPVP+RPWEQQ
Sbjct: 56   VEASGTARPGEIVPAANRTTAVNNTNTLGRPVPTRPWEQQ 95


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  138 bits (348), Expect = 3e-30
 Identities = 72/126 (57%), Positives = 82/126 (65%), Gaps = 6/126 (4%)
 Frame = -2

Query: 651 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFFGRIAMLIDQNAQAFHMFMSALLQLFDRS 472
           DQD             FW+S ++VMQG V  FGRI+ LIDQN QAFHMFMSALLQLFDRS
Sbjct: 13  DQDPNNPFGAPPSPPSFWVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLFDRS 72

Query: 471 GLLYGELARFVLRILGVRTKPNKVQ------XXXXXXXXXXPAQIEGPKAAPAGAWDGVW 310
           GLLYGELARF LR+LG+++KP KVQ                   IEGPKAAP+GAWD VW
Sbjct: 73  GLLYGELARFALRLLGIKSKPRKVQGPGPDGFPVPHNPRGNQNYIEGPKAAPSGAWDNVW 132

Query: 309 GNNVHN 292
           G+   N
Sbjct: 133 GDGTSN 138


>ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788885 [Glycine max]
          Length = 297

 Score =  135 bits (341), Expect = 2e-29
 Identities = 71/129 (55%), Positives = 84/129 (65%), Gaps = 10/129 (7%)
 Frame = -2

Query: 651 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFFGRIAMLIDQNAQAFHMFMSALLQLFDRS 472
           DQD             FWIS++RVMQG V FFGRI++LIDQN QAFH+FM+ALLQLFDRS
Sbjct: 168 DQDPNDPFGAPPSPPGFWISVLRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRS 227

Query: 471 GLLYGELARFVLRILGVRTKPNKVQXXXXXXXXXXPA----------QIEGPKAAPAGAW 322
           G+LYGELARFVLR+LG+RTK  KV                        IE PKAAP+G+W
Sbjct: 228 GMLYGELARFVLRLLGIRTKSKKVYPPGPNGQPLLGPGPHNPSGNVNYIEAPKAAPSGSW 287

Query: 321 DGVWGNNVH 295
           D VWGN+ +
Sbjct: 288 DNVWGNDAN 296



 Score = 71.2 bits (173), Expect = 6e-10
 Identities = 32/38 (84%), Positives = 37/38 (97%)
 Frame = -2

Query: 1065 VEASGTAKPGEIVSTNDATSAMNRNTLGRPVPSRPWEQ 952
            VEASGTAKPGEIVS++D ++A+NRNTLGRPVPSRPWEQ
Sbjct: 41   VEASGTAKPGEIVSSSDRSAAVNRNTLGRPVPSRPWEQ 78


>ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max]
          Length = 280

 Score =  135 bits (341), Expect = 2e-29
 Identities = 68/108 (62%), Positives = 77/108 (71%), Gaps = 8/108 (7%)
 Frame = -2

Query: 600 WISLMRVMQGFVTFFGRIAMLIDQNAQAFHMFMSALLQLFDRSGLLYGELARFVLRILGV 421
           WIS MRVMQG V FFGRI+MLIDQN QAFHMFM+ALLQLFDRSG+LYGELARFVLR+LG+
Sbjct: 170 WISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTALLQLFDRSGVLYGELARFVLRLLGI 229

Query: 420 RTKPNKVQXXXXXXXXXXPAQ--------IEGPKAAPAGAWDGVWGNN 301
           RTKP K+                      IEG K AP+G+WD VW N+
Sbjct: 230 RTKPKKINPPGPDGLPLPGQHNSSVNQNFIEGTKPAPSGSWDNVWEND 277



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -2

Query: 1065 VEASGTAKPGEIVSTNDATSAMNRNTLGRPVPSRPWEQ 952
            VEASGTAKPGEIV  +D T+ +NRN LGRP+P+RPWEQ
Sbjct: 36   VEASGTAKPGEIVPASDKTATVNRNALGRPLPTRPWEQ 73


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