BLASTX nr result

ID: Atractylodes22_contig00003662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003662
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             134   8e-30
ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-...   132   4e-29
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...   130   1e-28
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   130   1e-28
emb|CBI17597.3| unnamed protein product [Vitis vinifera]              130   1e-28

>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/129 (54%), Positives = 88/129 (68%)
 Frame = -3

Query: 394  NFDPLSVTSTFGWESETTFPKVLGDIIESLAGAIFVDSGYDKDRVFQSIRXXXXXXXXXX 215
            NF+ L   STFGWESETTFPKVLGD+IESLAGAIFVDSG++KD VFQS+R          
Sbjct: 1267 NFEKLDPASTFGWESETTFPKVLGDVIESLAGAIFVDSGFNKDVVFQSVRTLLEPLITPD 1326

Query: 214  XXXLHPVKELNEICQKNHYEVKKRAKCADDGTISFTIEVESNNLVVFKDTCKSTDKEMAE 35
               LHPV+EL+E+C +  Y  KK     ++G    T+EVE++  V  K TC   DK+MAE
Sbjct: 1327 TVKLHPVRELSELCDQKGYIKKKNVVSRENGVAYITVEVEADG-VSHKFTCSERDKKMAE 1385

Query: 34   KLASKSVLR 8
            K+A K+VL+
Sbjct: 1386 KVACKNVLK 1394


>ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 1393

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/131 (52%), Positives = 89/131 (67%)
 Frame = -3

Query: 394  NFDPLSVTSTFGWESETTFPKVLGDIIESLAGAIFVDSGYDKDRVFQSIRXXXXXXXXXX 215
            NF+ LS  +T+GWESE +FPKVLGD+IESLAGAI+VDSGYDK+ VF+SIR          
Sbjct: 1255 NFETLSSEATYGWESEISFPKVLGDVIESLAGAIYVDSGYDKEIVFRSIRPLLEPLVSPE 1314

Query: 214  XXXLHPVKELNEICQKNHYEVKKRAKCADDGTISFTIEVESNNLVVFKDTCKSTDKEMAE 35
                HP +ELNE+CQK +Y++KK      +G    T+EVE N   +FK T  S D+E  E
Sbjct: 1315 TLKKHPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGR-IFKHTEISLDRETGE 1373

Query: 34   KLASKSVLRSI 2
            K+ASK VL+S+
Sbjct: 1374 KVASKEVLKSL 1384


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  130 bits (327), Expect = 1e-28
 Identities = 73/131 (55%), Positives = 89/131 (67%)
 Frame = -3

Query: 394  NFDPLSVTSTFGWESETTFPKVLGDIIESLAGAIFVDSGYDKDRVFQSIRXXXXXXXXXX 215
            NFD L V STFGWESE++FPKVLGD+IESLAGAI VDS Y+K+ VFQSIR          
Sbjct: 1258 NFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPE 1317

Query: 214  XXXLHPVKELNEICQKNHYEVKKRAKCADDGTISFTIEVESNNLVVFKDTCKSTDKEMAE 35
               LHP +EL E+CQK HY++ KR   + +G  S TIEVE+N     K T  ++DK  A 
Sbjct: 1318 TVKLHPARELGELCQKEHYDI-KRVVVSQNGKASVTIEVEANG-AKHKHT-STSDKRTAT 1374

Query: 34   KLASKSVLRSI 2
            KLASK VL+S+
Sbjct: 1375 KLASKEVLKSL 1385


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/130 (53%), Positives = 87/130 (66%)
 Frame = -3

Query: 391  FDPLSVTSTFGWESETTFPKVLGDIIESLAGAIFVDSGYDKDRVFQSIRXXXXXXXXXXX 212
            F   S+ STFGWESET+FPKVLGD+IESLAGAI VDSGY+K+ VFQSIR           
Sbjct: 1265 FQKSSLGSTFGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVFQSIRPLLEPLITPAT 1324

Query: 211  XXLHPVKELNEICQKNHYEVKKRAKCADDGTISFTIEVESNNLVVFKDTCKSTDKEMAEK 32
              LHP +EL+E+CQK H++ KK     +    S TI V +N  V FK T  + DK+ A+K
Sbjct: 1325 VRLHPARELSELCQKQHFDYKKSVVSYNGRNASITIVVGANG-VTFKHTATAADKKTAKK 1383

Query: 31   LASKSVLRSI 2
            LASK VL+S+
Sbjct: 1384 LASKEVLKSL 1393


>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
          Length = 1340

 Score =  130 bits (327), Expect = 1e-28
 Identities = 73/131 (55%), Positives = 89/131 (67%)
 Frame = -3

Query: 394  NFDPLSVTSTFGWESETTFPKVLGDIIESLAGAIFVDSGYDKDRVFQSIRXXXXXXXXXX 215
            NFD L V STFGWESE++FPKVLGD+IESLAGAI VDS Y+K+ VFQSIR          
Sbjct: 1204 NFDKLPVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPE 1263

Query: 214  XXXLHPVKELNEICQKNHYEVKKRAKCADDGTISFTIEVESNNLVVFKDTCKSTDKEMAE 35
               LHP +EL E+CQK HY++ KR   + +G  S TIEVE+N     K T  ++DK  A 
Sbjct: 1264 TVKLHPARELGELCQKEHYDI-KRVVVSQNGKASVTIEVEANG-AKHKHT-STSDKRTAT 1320

Query: 34   KLASKSVLRSI 2
            KLASK VL+S+
Sbjct: 1321 KLASKEVLKSL 1331


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