BLASTX nr result

ID: Atractylodes22_contig00003642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003642
         (3747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   434   e-119
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   433   e-118
ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   425   e-116
ref|XP_002307213.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleop...   410   e-111

>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
           vinifera]
          Length = 264

 Score =  434 bits (1117), Expect = e-119
 Identities = 208/247 (84%), Positives = 227/247 (91%)
 Frame = -1

Query: 996 AMYGSGGLSDGYEIGSKRPRMMESNPYFAVSSGSSGYHPYDYSTGFQPSTFPVVRLRGLP 817
           AM GSGG+SDGYEIGSKR RMMESNPYFAVSS +SG+ PY Y +GFQP TFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLP 66

Query: 816 FNCTDVDIFKFFSGLEIVDVLLVNKSGRFSGEAFVVFTRPMQADLALQKDRQNMGRRYVE 637
           FNCTD+DIFKFF+GL+IVDVLLVNKSGRFSGEA+VVF   MQAD ALQ+DRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVE 126

Query: 636 VFKCKKQDYYNAVAAEVKYEGIYDNDYHGSPPPSRSKRFQDKDQLEYTEMLKLRGLPFSV 457
           VF+CKKQDYY+AVA+EV YEGIYDND+HGSPPPSRSKRF DKDQ+E+TE+LKLRGLPFSV
Sbjct: 127 VFRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSV 186

Query: 456 KKSDILEFFKDFNVADGKVHIACRPDGKATGEAYVEFASAEDAKQAMSKDKMMIGSRYVE 277
           KKS ILEFF DF + D KVHIACRPDGKATGEAYVEFASAE+AK+AM KDKM IGSRYVE
Sbjct: 187 KKSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVE 246

Query: 276 LFPSTPD 256
           LFPSTPD
Sbjct: 247 LFPSTPD 253


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  433 bits (1113), Expect = e-118
 Identities = 207/246 (84%), Positives = 226/246 (91%)
 Frame = -1

Query: 993 MYGSGGLSDGYEIGSKRPRMMESNPYFAVSSGSSGYHPYDYSTGFQPSTFPVVRLRGLPF 814
           M GSGG+SDGYEIGSKR RMMESNPYFAVSS +SG+ PY Y +GFQP TFPVVRLRGLPF
Sbjct: 1   MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPPTFPVVRLRGLPF 60

Query: 813 NCTDVDIFKFFSGLEIVDVLLVNKSGRFSGEAFVVFTRPMQADLALQKDRQNMGRRYVEV 634
           NCTD+DIFKFF+GL+IVDVLLVNKSGRFSGEA+VVF   MQAD ALQ+DRQNMGRRYVEV
Sbjct: 61  NCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVEV 120

Query: 633 FKCKKQDYYNAVAAEVKYEGIYDNDYHGSPPPSRSKRFQDKDQLEYTEMLKLRGLPFSVK 454
           F+CKKQDYY+AVA+EV YEGIYDND+HGSPPPSRSKRF DKDQ+E+TE+LKLRGLPFSVK
Sbjct: 121 FRCKKQDYYHAVASEVNYEGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPFSVK 180

Query: 453 KSDILEFFKDFNVADGKVHIACRPDGKATGEAYVEFASAEDAKQAMSKDKMMIGSRYVEL 274
           KS ILEFF DF + D KVHIACRPDGKATGEAYVEFASAE+AK+AM KDKM IGSRYVEL
Sbjct: 181 KSQILEFFGDFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSRYVEL 240

Query: 273 FPSTPD 256
           FPSTPD
Sbjct: 241 FPSTPD 246


>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis] gi|223539109|gb|EEF40705.1| heterogeneous
           nuclear ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  425 bits (1092), Expect = e-116
 Identities = 198/247 (80%), Positives = 225/247 (91%)
 Frame = -1

Query: 996 AMYGSGGLSDGYEIGSKRPRMMESNPYFAVSSGSSGYHPYDYSTGFQPSTFPVVRLRGLP 817
           AM GSGG+SDGYE+GSKRPRMMESNPYFAVS GSSG+ PY Y  GFQ + FPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRPRMMESNPYFAVSGGSSGFQPYGYGGGFQSAPFPVVRLRGLP 66

Query: 816 FNCTDVDIFKFFSGLEIVDVLLVNKSGRFSGEAFVVFTRPMQADLALQKDRQNMGRRYVE 637
           FNCTD+DIFKFF+GL+IVDVLLVNK+GRF+GEAFVVF   MQ + ALQ+DRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGAMQVEFALQRDRQNMGRRYVE 126

Query: 636 VFKCKKQDYYNAVAAEVKYEGIYDNDYHGSPPPSRSKRFQDKDQLEYTEMLKLRGLPFSV 457
           VF+CK+QDYYNAVAAEV YEGIYD DYHGSPPPS++KRF DKDQLEYTE+LK+RGLPFS 
Sbjct: 127 VFRCKRQDYYNAVAAEVNYEGIYDTDYHGSPPPSKAKRFSDKDQLEYTEILKMRGLPFSA 186

Query: 456 KKSDILEFFKDFNVADGKVHIACRPDGKATGEAYVEFASAEDAKQAMSKDKMMIGSRYVE 277
           KK +I+EFFK+F + + ++HIACRPDGKATGEAYVEFASA++AK+AMSKDKM IGSRYVE
Sbjct: 187 KKPEIIEFFKEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAMSKDKMTIGSRYVE 246

Query: 276 LFPSTPD 256
           LFPSTPD
Sbjct: 247 LFPSTPD 253


>ref|XP_002307213.1| predicted protein [Populus trichocarpa] gi|222856662|gb|EEE94209.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  424 bits (1090), Expect = e-116
 Identities = 199/246 (80%), Positives = 224/246 (91%)
 Frame = -1

Query: 993 MYGSGGLSDGYEIGSKRPRMMESNPYFAVSSGSSGYHPYDYSTGFQPSTFPVVRLRGLPF 814
           M GSGG+SDGYE+GSKR RMMESNPYFAVSSG+SG+ PY Y  GFQP  FPVVRLRGLPF
Sbjct: 1   MLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGASGFQPYGYGGGFQPPPFPVVRLRGLPF 60

Query: 813 NCTDVDIFKFFSGLEIVDVLLVNKSGRFSGEAFVVFTRPMQADLALQKDRQNMGRRYVEV 634
           NC+DV+I KFF+GL+IVDVLLVNKSGRF+GEAFVVF  PMQ + ALQ+DRQNMGRRYVEV
Sbjct: 61  NCSDVEILKFFAGLDIVDVLLVNKSGRFTGEAFVVFAGPMQVEFALQRDRQNMGRRYVEV 120

Query: 633 FKCKKQDYYNAVAAEVKYEGIYDNDYHGSPPPSRSKRFQDKDQLEYTEMLKLRGLPFSVK 454
           F+CK+QDYYNAVAAEV YEGIYDNDYHGSPPPSR+KRF DKDQ+EYTE+LK+RGLPFS K
Sbjct: 121 FRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPSRAKRFSDKDQMEYTEILKMRGLPFSAK 180

Query: 453 KSDILEFFKDFNVADGKVHIACRPDGKATGEAYVEFASAEDAKQAMSKDKMMIGSRYVEL 274
           K++I+EFFKDF + D ++HIACRPDGKATGEAYVEF SAE+AK+AMSKDKM IGSRYVEL
Sbjct: 181 KAEIIEFFKDFKLIDERIHIACRPDGKATGEAYVEFISAEEAKRAMSKDKMTIGSRYVEL 240

Query: 273 FPSTPD 256
           FPST D
Sbjct: 241 FPSTQD 246


>ref|XP_003534236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
           1 [Glycine max]
          Length = 264

 Score =  410 bits (1054), Expect = e-111
 Identities = 200/248 (80%), Positives = 219/248 (88%), Gaps = 1/248 (0%)
 Frame = -1

Query: 996 AMYGSGGLSDGYEIGSKRPRMMESNPYFAVSSGSSGYHPYDYSTGFQPSTFPVVRLRGLP 817
           AM GSGG+SDGYE+GSKR RMMESNPYFAVSSG+ G  PY Y+ GFQP  FPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGT-GNLPYGYAGGFQPPPFPVVRLRGLP 65

Query: 816 FNCTDVDIFKFFSGLEIVDVLLVNKSGRFSGEAFVVFTRPMQADLALQKDRQNMGRRYVE 637
           FNCTD+DI KFF+GL IVDVLLVNKSGRFSGEAFVVF   MQ + ALQ+DRQNMGRRYVE
Sbjct: 66  FNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYVE 125

Query: 636 VFKCKKQDYYNAVAAEVKYEGIYDNDYHG-SPPPSRSKRFQDKDQLEYTEMLKLRGLPFS 460
           VF+CKKQDYYNAVA E+ YEGIYDNDYHG SPPPSR KRF DKDQ+EYTE+LK+RGLPF 
Sbjct: 126 VFRCKKQDYYNAVAGEINYEGIYDNDYHGSSPPPSRLKRFNDKDQMEYTEILKMRGLPFQ 185

Query: 459 VKKSDILEFFKDFNVADGKVHIACRPDGKATGEAYVEFASAEDAKQAMSKDKMMIGSRYV 280
           V KS I+EFFKDF + + +VHIACRPDGKATGEAYVEF SAE+AK+AMSKDKM IGSRYV
Sbjct: 186 VTKSQIVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSAEEAKRAMSKDKMTIGSRYV 245

Query: 279 ELFPSTPD 256
           ELFPSTPD
Sbjct: 246 ELFPSTPD 253


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