BLASTX nr result

ID: Atractylodes22_contig00003617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003617
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   218   5e-55
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...   208   3e-52
ref|XP_002520859.1| conserved hypothetical protein [Ricinus comm...   197   7e-49
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian...   189   3e-46
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal...   184   5e-45

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  218 bits (554), Expect = 5e-55
 Identities = 112/159 (70%), Positives = 131/159 (82%)
 Frame = -1

Query: 478 SMEDSQDVCDPVERDNNTCSTSTSSGYRLFDRQTTIHQLMGGGKAADVLLWKRRRISLGI 299
           S ED  + C  V+ D    STS   GYRLFDR+++IHQ+MGGGKAADVLLWKRRR+S G 
Sbjct: 3   SSEDPSNAC--VDGD---ASTSGGPGYRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGT 57

Query: 298 IIVATVAWLIFERSGLSFLTICSNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMV 119
           I+VATVAW++FERSGLSFL+ICS+VLL LIV+ FL ANYA+ R+KQ+++LPEL LSEEMV
Sbjct: 58  IVVATVAWILFERSGLSFLSICSDVLLILIVVLFLRANYAAFRNKQLKSLPELELSEEMV 117

Query: 118 NYAAASFRTKVNYLLLMAHDITLGKDFRLFFMVVGFLWL 2
           N  A SFR K+NYLLLMAHDITLGKDFRLFF VV  LWL
Sbjct: 118 NSVAGSFRVKINYLLLMAHDITLGKDFRLFFKVVLGLWL 156


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  208 bits (530), Expect = 3e-52
 Identities = 112/173 (64%), Positives = 132/173 (76%), Gaps = 15/173 (8%)
 Frame = -1

Query: 475 MEDSQDVCDPVE-------RDNNTCSTSTS--------SGYRLFDRQTTIHQLMGGGKAA 341
           M++S DV D V        R++   STS++        SGYRLFDRQ ++HQLMG GKAA
Sbjct: 1   MDNSSDVIDTVSGNGGGDSRNDAAASTSSAPSSPRAITSGYRLFDRQDSLHQLMGAGKAA 60

Query: 340 DVLLWKRRRISLGIIIVATVAWLIFERSGLSFLTICSNVLLFLIVLRFLHANYASLRDKQ 161
           DVLLWK   +S G+I+VATV+W IFERSGL FLTICS+VLL LIVL F+ AN A + +KQ
Sbjct: 61  DVLLWKWWHVSFGVIMVATVSWFIFERSGLPFLTICSDVLLILIVLLFVRANIADMINKQ 120

Query: 160 IQTLPELVLSEEMVNYAAASFRTKVNYLLLMAHDITLGKDFRLFFMVVGFLWL 2
           +Q+LPELVLSEEMVN AAASFR K+N +LLMAHDITLGKDFRLFF VV FLWL
Sbjct: 121 LQSLPELVLSEEMVNSAAASFRVKINNVLLMAHDITLGKDFRLFFKVVVFLWL 173


>ref|XP_002520859.1| conserved hypothetical protein [Ricinus communis]
           gi|223539990|gb|EEF41568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  197 bits (501), Expect = 7e-49
 Identities = 104/160 (65%), Positives = 124/160 (77%), Gaps = 8/160 (5%)
 Frame = -1

Query: 475 MEDSQDVCDPVE------RDNNTCSTSTSSG--YRLFDRQTTIHQLMGGGKAADVLLWKR 320
           ME+S D  D V+      R++ T S+S SS   YRLF RQ    Q MGGGKAADVLLWKR
Sbjct: 1   MENSDDFVDKVDVNGGETRNDYTASSSCSSSSRYRLFGRQAPFQQFMGGGKAADVLLWKR 60

Query: 319 RRISLGIIIVATVAWLIFERSGLSFLTICSNVLLFLIVLRFLHANYASLRDKQIQTLPEL 140
             +S  +II+ATVAW IFERSGL FLTICS+VLL + VL F+HAN+A++R+KQ Q+LPEL
Sbjct: 61  WHVSFSVIIIATVAWFIFERSGLPFLTICSDVLLVVTVLLFIHANFAAIRNKQPQSLPEL 120

Query: 139 VLSEEMVNYAAASFRTKVNYLLLMAHDITLGKDFRLFFMV 20
           VLSEEMVN AAASFR K+N +LLMAHDIT+GKDF+LFF V
Sbjct: 121 VLSEEMVNNAAASFRVKINNVLLMAHDITIGKDFKLFFKV 160


>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
           Full=Reticulon-like protein B16; Short=AtRTNLB16
           gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
           thaliana] gi|28827594|gb|AAO50641.1| unknown protein
           [Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
           reticulon-like protein B16 [Arabidopsis thaliana]
          Length = 226

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/137 (65%), Positives = 116/137 (84%)
 Frame = -1

Query: 412 TSSGYRLFDRQTTIHQLMGGGKAADVLLWKRRRISLGIIIVATVAWLIFERSGLSFLTIC 233
           +SS YRL  RQ T+HQ MGGGKAAD+LLW+RR +SLG+II++TVAWLIFE SGL FL++ 
Sbjct: 19  SSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVS 78

Query: 232 SNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMVNYAAASFRTKVNYLLLMAHDIT 53
           S+VLL +I++ F+HA  ++ R++Q+ +LPELVLSEEMVN AAASFR K+N+LL+MAHD+T
Sbjct: 79  SDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVT 138

Query: 52  LGKDFRLFFMVVGFLWL 2
           +G DFRLFF VV  LWL
Sbjct: 139 VGNDFRLFFKVVICLWL 155


>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641453|gb|AEE74974.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 227

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/138 (65%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 TSSGYRLFDRQTTIHQLMGGGKAADVLLWKRRRISLGIIIVATVAWLIFERSGLSFLTIC 233
           +SS YRL  RQ T+HQ MGGGKAAD+LLW+RR +SLG+II++TVAWLIFE SGL FL++ 
Sbjct: 19  SSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVS 78

Query: 232 SNVLLFLIVLRFLHANYASLRDKQIQTLPELVLSEEMVNYAAASFRTKVNYLLLMAHDIT 53
           S+VLL +I++ F+HA  ++ R++Q+ +LPELVLSEEMVN AAASFR K+N+LL+MAHD+T
Sbjct: 79  SDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVT 138

Query: 52  LGKDFRLFF-MVVGFLWL 2
           +G DFRLFF  VV  LWL
Sbjct: 139 VGNDFRLFFKQVVICLWL 156


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