BLASTX nr result

ID: Atractylodes22_contig00003609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003609
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   187   2e-45
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   181   1e-43
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...   176   6e-42
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...   172   6e-41
ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arab...   169   5e-40

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score =  187 bits (475), Expect = 2e-45
 Identities = 100/187 (53%), Positives = 126/187 (67%), Gaps = 6/187 (3%)
 Frame = +1

Query: 79  MYSSMIFLERSRIFDHNVLHRFTSLRHMGGGPRTFPGGLNKWQWKRLHEKQARQKEKRLL 258
           MYSS+  L R       +L  F   R MGGGPRTFPGG+NKWQWKRLHEK+AR+KEKRLL
Sbjct: 1   MYSSI--LRRHSSSSSKLLCTFFFARPMGGGPRTFPGGINKWQWKRLHEKKAREKEKRLL 58

Query: 259 DQEKQLYQARVRSEIRSKIANPDSSKHEEDTNSPNYKPLSPKEHIKALADRFMKEGAEDL 438
           D EKQLY+AR+RS+IR+K+A    S+   D++ PN+ P+SP++HIKALADRFMKEGAEDL
Sbjct: 59  DHEKQLYEARIRSQIRAKLAGKPVSEFSPDSDHPNHNPMSPQDHIKALADRFMKEGAEDL 118

Query: 439 WNEADGPIRSLSPQEISRIESN------HTPINLRKVISGQNHIASTQVSEVSSGFIYNQ 600
           WN+ DGP++  SP  + R  SN        P++LRK+ S    +       VS       
Sbjct: 119 WNDDDGPVK--SPPLLPRRPSNGLSRQIEPPVDLRKLTSHGRSLGPGNARIVS-----RA 171

Query: 601 LKPRHFS 621
           LKPRH+S
Sbjct: 172 LKPRHYS 178


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score =  181 bits (459), Expect = 1e-43
 Identities = 116/231 (50%), Positives = 145/231 (62%), Gaps = 18/231 (7%)
 Frame = +1

Query: 79  MYSSM-IFLERSR-IFDHNVLHRFTSLRHMGGGPRTFPGGLNKWQWKRLHEKQARQKEKR 252
           MY+S+ + L RS+ + DH     FT L  MGGGPRTFPGGLNKWQWKRLHEK+A++KEK 
Sbjct: 1   MYTSISVILRRSKTVSDHLQTRIFTRL--MGGGPRTFPGGLNKWQWKRLHEKRAKEKEKS 58

Query: 253 LLDQEKQLYQARVRSEIRSKIA-NPDSSKHEEDTNSPNYKPLSPKEHIKALADRFMKEGA 429
           LL+QEKQLYQAR+RS+IRSK+A  PDS     + N+ NY   SPK+HIKALADRFMKEGA
Sbjct: 59  LLEQEKQLYQARIRSQIRSKLAGEPDS-----NPNTNNYSATSPKDHIKALADRFMKEGA 113

Query: 430 EDLWNEADGPIRSLSPQEISR---IESN------HTPINLRKVISGQNHIASTQVSEVSS 582
           EDLWNE DGP+ S  P+   R   I SN      +TPI+LRKV+     + + +      
Sbjct: 114 EDLWNEDDGPLTSQLPKSNQRSGSIGSNQRPGSINTPIDLRKVMLEARSVHNFE------ 167

Query: 583 GFIYNQLKPRHFST------YLCSDNLYSLSKARHYSVRTSRFSYRKNDSS 717
              YN  K R +S          S+   +L K    S +  RF  R+N+SS
Sbjct: 168 NLSYNYTKTREYSVNSFNLGQKQSNESDNLKKRGLISQKVRRF--RRNESS 216


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  176 bits (445), Expect = 6e-42
 Identities = 98/189 (51%), Positives = 127/189 (67%), Gaps = 13/189 (6%)
 Frame = +1

Query: 79  MYSSMIFLERSRIFDHNVLHRFTSLRHMGGGPRTFPGGLNKWQWKRLHEKQARQKEKRLL 258
           MY S+I   RS+     +  R   +R MGGGPRTFPGGLNKWQWKRLHEK+A++KEKRLL
Sbjct: 1   MYPSLI--HRSKSLSEQLRTRIF-IRLMGGGPRTFPGGLNKWQWKRLHEKKAKEKEKRLL 57

Query: 259 DQEKQLYQARVRSEIRSKIA-------NPDSSKHEEDTNSPNYKPLSPKEHIKALADRFM 417
           DQEKQLYQAR+RS IRSK+A       NPD SK         + P+SPKEHIKALADRFM
Sbjct: 58  DQEKQLYQARMRSNIRSKLAGQPDPNLNPDPSK---------FNPMSPKEHIKALADRFM 108

Query: 418 KEGAEDLWNEADGPIRSLSPQEISRIESN------HTPINLRKVISGQNHIASTQVSEVS 579
           KEGAEDLWNE DGP+++ S +    + +N      ++P++LRK++S   +++        
Sbjct: 109 KEGAEDLWNEMDGPLKAPSDERPGFVGTNQRPGSINSPLDLRKLMSEGRNVSR---HREE 165

Query: 580 SGFIYNQLK 606
           +GF Y + +
Sbjct: 166 NGFNYRKFR 174


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score =  172 bits (436), Expect = 6e-41
 Identities = 100/217 (46%), Positives = 134/217 (61%), Gaps = 6/217 (2%)
 Frame = +1

Query: 85  SSMIFLERSRIFDHNVLHRFTSLRHMGGGPRTFPGGLNKWQWKRLHEKQARQKEKRLLDQ 264
           +S + L+R R F  ++L +    R MGGGPRTFPGGLNKWQWKR+HEK+A++KEKRLL+Q
Sbjct: 2   TSSVLLDRHRTFS-SLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60

Query: 265 EKQLYQARVRSEIRSKIANPDSSKHEEDTNSPNYKPLSPKEHIKALADRFMKEGAEDLWN 444
           EKQLYQAR+RS+IRSK+     +       S +Y P SP EHI  LA+RFMK+GA DLWN
Sbjct: 61  EKQLYQARIRSDIRSKLVGAHETSKNNSDPSTSYSPKSPSEHINDLANRFMKQGAIDLWN 120

Query: 445 EADGPIRSLSPQEIS------RIESNHTPINLRKVISGQNHIASTQVSEVSSGFIYNQLK 606
           E DGP+++  P+  +      RI SN    ++R  I  +  +A      V S ++     
Sbjct: 121 EDDGPLKTPLPRPAALNEGSRRIASNVRSGSIRSPIDVKRLLAENHDGFVGSHYM----- 175

Query: 607 PRHFSTYLCSDNLYSLSKARHYSVRTSRFSYRKNDSS 717
                  L  DN+    K R YSV+ SR S+R+N+SS
Sbjct: 176 ------GLNGDNV----KGRSYSVQ-SRRSFRRNESS 201


>ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arabidopsis lyrata subsp.
           lyrata] gi|297332258|gb|EFH62676.1| hypothetical protein
           ARALYDRAFT_893124 [Arabidopsis lyrata subsp. lyrata]
          Length = 808

 Score =  169 bits (428), Expect = 5e-40
 Identities = 91/164 (55%), Positives = 120/164 (73%), Gaps = 13/164 (7%)
 Frame = +1

Query: 88  SMIFLERSRIFDHNVLHRFTSLRHMGGGPRTFPGGLNKWQWKRLHEKQARQKEKRLLDQE 267
           S+I  ERS  F  ++  R  S R+MGGGPRTFPGGLNKWQWKR+HEK+AR+KE +LLDQE
Sbjct: 3   SLILRERSGSFTGSLWSRIFS-RNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQE 61

Query: 268 KQLYQARVRSEIRSKI-ANPDSSKHEEDTNSPNYKPLSPKEHIKALADRFMKEGAEDLWN 444
           KQLY+AR+R+EIR+K+  NPDS + +   +  ++ P+SPKEHIK LADRFMK GAEDLWN
Sbjct: 62  KQLYEARIRTEIRAKMWGNPDSGE-KTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDLWN 120

Query: 445 EADGPIR------SLSPQEISRIESN------HTPINLRKVISG 540
           E DGP++       LS ++  R  SN      ++ I++RK++SG
Sbjct: 121 ENDGPMKESDDGSGLSRRDNGRSGSNSIDSSSNSSIDVRKLVSG 164


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