BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003589
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-...   429   e-118
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   428   e-117
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   421   e-115
emb|CBI29513.3| unnamed protein product [Vitis vinifera]              417   e-114
emb|CBI37346.3| unnamed protein product [Vitis vinifera]              416   e-114

>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 966

 Score =  429 bits (1104), Expect = e-118
 Identities = 236/400 (59%), Positives = 278/400 (69%), Gaps = 6/400 (1%)
 Frame = -2

Query: 1182 MGKQKQQVISRFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPPPKISATVTFSPVKR 1003
            MGKQKQQVISRFFA                               P K+SATVTFSP KR
Sbjct: 1    MGKQKQQVISRFFAPKPKSPSLSSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKR 60

Query: 1002 LRTSQLLSPVSKPPKIPRLSSNSDLPESSRTKLSPHTRNPIPPLPNPTLHEKFLNKLLEP 823
            L +S + S ++ PPK            S R KLSPHT NP+P +PNP+LH++FL++LLEP
Sbjct: 61   LISSAIASQLT-PPK-----------SSKRPKLSPHTHNPLPSIPNPSLHQRFLDRLLEP 108

Query: 822  SHED----RENVSTSDAIVSVNPKYTPLEQQVVELKAKYKDVLLMVEVGYKFRFFGQDAE 655
            + +      +N  TS+       KYTPLEQQVV+LK +Y DVLLMVEVGY++RFFGQDA 
Sbjct: 109  TDDSFQPSNQNPRTSNG-ADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAV 167

Query: 654  NAARVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETATIKAHGSNKLG 475
             AARVLGIYAH+DHNF+TASIPTFRLNVHVRRLVSAGYKVGVVKQTETA IKAHGSNKLG
Sbjct: 168  IAARVLGIYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLG 227

Query: 474  PFCRGLSALYTKATLXXXXXXXXXXXXXGSCNNYLVCVVEKETADEKVGS--ESGIDVKI 301
            PFCRGLSALYTKATL                +NYL C+VE   + + V    E+G+DVKI
Sbjct: 228  PFCRGLSALYTKATLEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKI 287

Query: 300  GIVAVEISTGDVIYGEFDDNLLRNGLEAKILSLSPAELLLGEPLSKLTEKFLVAYAGPAS 121
            G+VA+EISTGDVIYGE+DDN +RNGLEA +LSLSPAELLLG+P+SK TEK L+ YAGPA 
Sbjct: 288  GMVAMEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPAL 347

Query: 120  NVRVERASRDRYADGGALAEVLSSYDKIGNSPLNDNPQGE 1
            NVRVER S D + DG ALAEV+S Y+ I  +   ++   E
Sbjct: 348  NVRVERVSGDFFKDGSALAEVMSLYENIDQNNFTEDNSPE 387


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  428 bits (1101), Expect = e-117
 Identities = 239/400 (59%), Positives = 281/400 (70%), Gaps = 8/400 (2%)
 Frame = -2

Query: 1182 MGKQKQQVISRFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPPPKISATVTFSPVKR 1003
            MGKQKQQVISRFFA                             + P K+SATVTFSP KR
Sbjct: 1    MGKQKQQVISRFFAPKPKSPSLSSSS-----------------SSPAKVSATVTFSPSKR 43

Query: 1002 LRTSQLLSPVSKPPKIPRLSSNSDLPESSRTKLSPHTRNPIPPLPNPTLHEKFLNKLLEP 823
            L +S + S ++ PPK            S R KLSPHT NP+P +PNP+LH++FL+KLLEP
Sbjct: 44   LISSAIASQLT-PPK-----------SSKRPKLSPHTHNPLPSIPNPSLHQRFLDKLLEP 91

Query: 822  SHED----RENVSTSDAIVSVNPKYTPLEQQVVELKAKYKDVLLMVEVGYKFRFFGQDAE 655
            + +      +N  TS+       KYTPLEQQVV+LK +Y DVLLMVEVGY++RFFGQDA 
Sbjct: 92   TDDSFQPSNQNPRTSNG-ADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAV 150

Query: 654  NAARVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETATIKAHGSNKLG 475
             AARVLGIYAH+DHNF+TASIPTFRLNVHVRRLVSAGYKVGVVKQTETA IKAHGSNKLG
Sbjct: 151  IAARVLGIYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLG 210

Query: 474  PFCRGLSALYTKATLXXXXXXXXXXXXXGSCNNYLVCVVEKETADEKVGS--ESGIDVKI 301
            PFCRGLSALYTKATL                +NYL C+VE   + + V    E+G+DVKI
Sbjct: 211  PFCRGLSALYTKATLEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKI 270

Query: 300  GIVAVEISTGDVIYGEFDDNLLRNGLEAKILSLSPAELLLGEPLSKLTEKFLVAYAGPAS 121
            G+VA+EISTGDVIYGE+DDN +RNGLEA +LSLSPAELLLG+P+SK TEK L+ YAGPA 
Sbjct: 271  GMVAMEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPAL 330

Query: 120  NVRVERASRDRYADGGALAEVLSSYDKI--GNSPLNDNPQ 7
            NVRVER S D + DG ALAEV+S Y+ I   N   ++NP+
Sbjct: 331  NVRVERVSGDCFKDGSALAEVMSLYENIDQNNFTEDNNPE 370


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  421 bits (1082), Expect = e-115
 Identities = 241/394 (61%), Positives = 274/394 (69%), Gaps = 4/394 (1%)
 Frame = -2

Query: 1182 MGKQKQQVISRFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-TPPPKISATVTFSPVK 1006
            MGKQKQQVISRFFA                              TPPPKIS TVTFSP K
Sbjct: 1    MGKQKQQVISRFFAPKPKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60

Query: 1005 RLRTSQLLSPVSKPPKIPRLSSNSDLPESSRTKLSPHTRNPIPPLPNPTLHEKFLNKLLE 826
            RL +S  +SP +KPPK P++S                  +PI    +P+LH+KF+ KLLE
Sbjct: 61   RLPSSH-VSPSTKPPKAPKIS------------------HPI----DPSLHQKFVQKLLE 97

Query: 825  PSHEDRENVSTSDAIVSVNPKYTPLEQQVVELKAKYKDVLLMVEVGYKFRFFGQDAENAA 646
            PS       ST   +     KYTPLEQQVV+LK KY DVLLMVEVGY++RFFG+DAE AA
Sbjct: 98   PSS------STPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAA 151

Query: 645  RVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETATIKAHGSNKLGPFC 466
            RVLGIYAH+DHNFLTASIPTFRLNVHVRRLVSAG+KVGVVKQTETA IKAHGSNKLGPFC
Sbjct: 152  RVLGIYAHVDHNFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFC 211

Query: 465  RGLSALYTKATLXXXXXXXXXXXXXGSCNNYLVCVVEKETADEK---VGSESGIDVKIGI 295
            RGLSALYTKATL             GS NNYLVCVVEK  + E     G   G DV+IGI
Sbjct: 212  RGLSALYTKATLEAAEEVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGI 271

Query: 294  VAVEISTGDVIYGEFDDNLLRNGLEAKILSLSPAELLLGEPLSKLTEKFLVAYAGPASNV 115
            VAVE+STGDV++GEF+DN +R GLEA ILS+SPAELLLG PLSK TEK L+AYAGPASNV
Sbjct: 272  VAVEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAYAGPASNV 331

Query: 114  RVERASRDRYADGGALAEVLSSYDKIGNSPLNDN 13
            RVER SRD ++DGGALAEV+S Y+ +  +   D+
Sbjct: 332  RVERTSRDCFSDGGALAEVMSLYENLSENSRADH 365


>emb|CBI29513.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  417 bits (1072), Expect = e-114
 Identities = 240/396 (60%), Positives = 272/396 (68%), Gaps = 6/396 (1%)
 Frame = -2

Query: 1182 MGKQKQQVISRFFA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPPPKISATVTFSP 1012
            MGKQKQQVISRFFA                                TPPPKIS TVTFSP
Sbjct: 1    MGKQKQQVISRFFAPKSKAPSSSSFSIPSSPSPSPSPSPSSLPNPPTPPPKISTTVTFSP 60

Query: 1011 VKRLRTSQLLSPVSKPPKIPRLSSNSDLPESSRTKLSPHTRNPIPPLPNPTLHEKFLNKL 832
             KRL +S  +SP +KPPK P++S                  +PI    +P+LH+KFL KL
Sbjct: 61   SKRLPSSH-VSPSTKPPKAPKIS------------------HPI----DPSLHQKFLQKL 97

Query: 831  LEPSHEDRENVSTSDAIVSVNPKYTPLEQQVVELKAKYKDVLLMVEVGYKFRFFGQDAEN 652
            LEPS       ST   +     KYTPLEQQVV+LK KY DVLLMVEVGY++RFFG+DAE 
Sbjct: 98   LEPSS------STPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEI 151

Query: 651  AARVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETATIKAHGSNKLGP 472
            AARVL IYAH+DHNFLTASIPTFRLNVHVRRLVSAG+KVGVVKQTETA IKAHGSNKLGP
Sbjct: 152  AARVLAIYAHVDHNFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGP 211

Query: 471  FCRGLSALYTKATLXXXXXXXXXXXXXGSCNNYLVCVVEKETADEK---VGSESGIDVKI 301
            FCRGLSALYTKATL             GS NNYLVCVVEK  + E     G   G DV+I
Sbjct: 212  FCRGLSALYTKATLEAAEDVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRI 271

Query: 300  GIVAVEISTGDVIYGEFDDNLLRNGLEAKILSLSPAELLLGEPLSKLTEKFLVAYAGPAS 121
            GIVAV++STGDV++GEF+DN +R GLEA ILS+SPAELLLG PLSK TEK L+AYAGPAS
Sbjct: 272  GIVAVKVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAYAGPAS 331

Query: 120  NVRVERASRDRYADGGALAEVLSSYDKIGNSPLNDN 13
            NVRVER SRD ++DGGALAEV+S Y+ +      D+
Sbjct: 332  NVRVERTSRDCFSDGGALAEVMSLYENLSEDSRADH 367


>emb|CBI37346.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score =  416 bits (1070), Expect = e-114
 Identities = 238/394 (60%), Positives = 273/394 (69%), Gaps = 4/394 (1%)
 Frame = -2

Query: 1182 MGKQKQQVISRFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-TPPPKISATVTFSPVK 1006
            MGKQKQQVISRFFA                              TPPPKIS TVTFSP K
Sbjct: 1    MGKQKQQVISRFFAPKSKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60

Query: 1005 RLRTSQLLSPVSKPPKIPRLSSNSDLPESSRTKLSPHTRNPIPPLPNPTLHEKFLNKLLE 826
            RL +S  +SP +KPPK P++S                  +PI    +P+LH+KF+ KLL+
Sbjct: 61   RLPSSH-VSPSTKPPKAPKIS------------------HPI----DPSLHQKFVQKLLQ 97

Query: 825  PSHEDRENVSTSDAIVSVNPKYTPLEQQVVELKAKYKDVLLMVEVGYKFRFFGQDAENAA 646
            PS       ST   +     KYTPLEQQVV+LK KY DVLLMVEVGY++RFFG+DAE AA
Sbjct: 98   PSS------STPTKLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAA 151

Query: 645  RVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETATIKAHGSNKLGPFC 466
            RVLGIYAH+DHNFLTASIPTFRLNVHVRRLVSAG+KVGVVKQTETA IKAHGSNKLGPFC
Sbjct: 152  RVLGIYAHVDHNFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFC 211

Query: 465  RGLSALYTKATLXXXXXXXXXXXXXGSCNNYLVCVVEKETADEK---VGSESGIDVKIGI 295
            RGLSALYTKATL             GS NNYLVCVVEK  + E     G   G DV+IGI
Sbjct: 212  RGLSALYTKATLEAAEDVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGI 271

Query: 294  VAVEISTGDVIYGEFDDNLLRNGLEAKILSLSPAELLLGEPLSKLTEKFLVAYAGPASNV 115
            VAVE+STGDV++G+F+DN +R GLEA ILS+SPAELLLG PLSK TEK L+AYAGPASNV
Sbjct: 272  VAVEVSTGDVVHGKFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAYAGPASNV 331

Query: 114  RVERASRDRYADGGALAEVLSSYDKIGNSPLNDN 13
            R+ER SRD ++DGGALAEV+S Y+ +      D+
Sbjct: 332  RLERTSRDCFSDGGALAEVMSLYENLSEDSRVDH 365