BLASTX nr result

ID: Atractylodes22_contig00003579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003579
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634820.1| PREDICTED: uncharacterized protein LOC100854...   122   3e-26
ref|XP_002513375.1| pentatricopeptide repeat-containing protein,...   121   9e-26
gb|AFK38998.1| unknown [Medicago truncatula]                          116   3e-24
ref|NP_001046027.1| Os02g0170200 [Oryza sativa Japonica Group] g...   115   5e-24
gb|AFW70289.1| splicing factor, arginine/serine-rich 12 [Zea mays]    115   5e-24

>ref|XP_003634820.1| PREDICTED: uncharacterized protein LOC100854377 [Vitis vinifera]
           gi|297736156|emb|CBI24194.3| unnamed protein product
           [Vitis vinifera]
          Length = 147

 Score =  122 bits (307), Expect = 3e-26
 Identities = 54/80 (67%), Positives = 68/80 (85%)
 Frame = +3

Query: 72  DRRVISNFKELSDADYFSKNNEFATWLKDERGTFFSDLSSESARKLFAEFVKDWNNKKLD 251
           DR +I  F+ELS+ DYFSKNNEFA WLK++R  +F+DLS+ESAR+LF EFVKDWN +KL+
Sbjct: 67  DRHLILEFQELSNDDYFSKNNEFAAWLKEKRKIYFADLSTESARELFTEFVKDWNKQKLE 126

Query: 252 SKFYDGIVIGPRSSHNWKIK 311
           SK+Y+GIV GPR+SH W IK
Sbjct: 127 SKYYEGIVTGPRTSHKWNIK 146


>ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547283|gb|EEF48778.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 922

 Score =  121 bits (303), Expect = 9e-26
 Identities = 52/76 (68%), Positives = 66/76 (86%)
 Frame = +3

Query: 84  ISNFKELSDADYFSKNNEFATWLKDERGTFFSDLSSESARKLFAEFVKDWNNKKLDSKFY 263
           + NF+ELS+ DYFSKNNEFATWLK+E+  FFSDLSSESAR++F +FVKDWNN+KLD ++Y
Sbjct: 73  VLNFQELSNDDYFSKNNEFATWLKEEKKVFFSDLSSESAREMFTDFVKDWNNQKLDPQYY 132

Query: 264 DGIVIGPRSSHNWKIK 311
           +GI  GPRS+HNW  +
Sbjct: 133 EGISSGPRSAHNWTFR 148


>gb|AFK38998.1| unknown [Medicago truncatula]
          Length = 153

 Score =  116 bits (290), Expect = 3e-24
 Identities = 52/74 (70%), Positives = 62/74 (83%)
 Frame = +3

Query: 90  NFKELSDADYFSKNNEFATWLKDERGTFFSDLSSESARKLFAEFVKDWNNKKLDSKFYDG 269
           NF+ELS  DYF+KNNEFATWLK+E+  FFSDL SESAR+LFAEFVK WN  KL+S +Y+G
Sbjct: 79  NFQELSGDDYFAKNNEFATWLKEEKNVFFSDLLSESARELFAEFVKAWNRGKLESNYYEG 138

Query: 270 IVIGPRSSHNWKIK 311
           I   PR++HNWKIK
Sbjct: 139 IKTAPRTAHNWKIK 152


>ref|NP_001046027.1| Os02g0170200 [Oryza sativa Japonica Group]
           gi|49387556|dbj|BAD25487.1| unknown protein [Oryza
           sativa Japonica Group] gi|49388073|dbj|BAD25185.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113535558|dbj|BAF07941.1| Os02g0170200 [Oryza sativa
           Japonica Group] gi|125580968|gb|EAZ21899.1| hypothetical
           protein OsJ_05552 [Oryza sativa Japonica Group]
           gi|215765921|dbj|BAG98149.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 162

 Score =  115 bits (288), Expect = 5e-24
 Identities = 52/75 (69%), Positives = 62/75 (82%)
 Frame = +3

Query: 90  NFKELSDADYFSKNNEFATWLKDERGTFFSDLSSESARKLFAEFVKDWNNKKLDSKFYDG 269
           +FKE+S  DYF+KNNEFATWLK+E+G FFSDLSSESAR LF +FVK WN  KL S++Y+G
Sbjct: 88  DFKEISKDDYFAKNNEFATWLKEEKGKFFSDLSSESARDLFEKFVKTWNKGKLPSQYYEG 147

Query: 270 IVIGPRSSHNWKIKV 314
           I  GPRS+H W IKV
Sbjct: 148 ITRGPRSAHKWNIKV 162


>gb|AFW70289.1| splicing factor, arginine/serine-rich 12 [Zea mays]
          Length = 157

 Score =  115 bits (288), Expect = 5e-24
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = +3

Query: 93  FKELSDADYFSKNNEFATWLKDERGTFFSDLSSESARKLFAEFVKDWNNKKLDSKFYDGI 272
           FKE+S  DYF+KNNEFATWLK+E+G +FSDLSSESAR LF +FVK WN  KL S++Y+GI
Sbjct: 84  FKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESARDLFLKFVKQWNKGKLPSQYYEGI 143

Query: 273 VIGPRSSHNWKIK 311
             GPRS+HNW IK
Sbjct: 144 TSGPRSAHNWNIK 156


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