BLASTX nr result

ID: Atractylodes22_contig00003549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003549
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]    62   8e-08
ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...    60   2e-07
ref|XP_002518012.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_004147334.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...    57   2e-06

>ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|222862585|gb|EEF00092.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
 Frame = +3

Query: 366 NRGDGKKF--------LPKGKNVATASSSDVDQLNQAVQDVNLDSSQ-DGSWEVFSKKNK 518
           +RG GK F          KGKNVA AS   V+QL+Q V D+ LDS Q DG WEV +KK+K
Sbjct: 3   SRGGGKPFGSGANTSLSSKGKNVAEASGPAVEQLSQGVADIGLDSVQDDGEWEVIAKKSK 62

Query: 519 NRTGNGAS 542
           NR G+ A+
Sbjct: 63  NRAGSSAA 70


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +3

Query: 264 RRMKSAEQLVLALDIPEREENALLVMSCKRGSQSNRGDG-KKFLPKGKNVATASSSDVDQ 440
           RR  S +  ++ ++    E+  L  MS ++G       G     PK ++ +   +  V+ 
Sbjct: 284 RRPSSLDLPLVFIEGSGLEKRLLDKMSLRKGGGKQLAAGASNASPKSRHASEVPNVGVEP 343

Query: 441 LNQAVQDVNLDSSQDGSWEVFSKKNKNRTGNGAS 542
           LNQ V D++LDS+QDG WEV+S+K+KNR G+ A+
Sbjct: 344 LNQGVADISLDSAQDGEWEVYSRKSKNRAGSSAA 377


>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
           vinifera]
          Length = 718

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +3

Query: 318 EENALLVMSCKRGSQSNRGDG-KKFLPKGKNVATASSSDVDQLNQAVQDVNLDSSQDGSW 494
           E+  L  MS ++G       G     PK ++ +   +  V+ LNQ V D++LDS+QDG W
Sbjct: 65  EKRLLDKMSLRKGGGKQLAAGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEW 124

Query: 495 EVFSKKNKNRTGNGAS 542
           EV+S+K+KNR G+ A+
Sbjct: 125 EVYSRKSKNRAGSSAA 140


>ref|XP_002518012.1| conserved hypothetical protein [Ricinus communis]
           gi|223542994|gb|EEF44530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 634

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +3

Query: 354 GSQSNRGDGKKFLPKGKNVATASSSDVDQLNQAVQDVNLDSSQ-DGSWEVFSKKNKNRTG 530
           G  SN   G     KGKN +  SS  ++QL+Q+V D+NLD+++ DG WEV ++K KNR G
Sbjct: 7   GKPSNAVSGNNSSSKGKNSSHVSSPKLEQLSQSVADINLDATEDDGQWEVIARKTKNRAG 66

Query: 531 NGAS 542
           + A+
Sbjct: 67  SSAA 70


>ref|XP_004147334.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Cucumis
           sativus] gi|449508711|ref|XP_004163389.1| PREDICTED:
           protein SUPPRESSOR OF GENE SILENCING 3-like [Cucumis
           sativus]
          Length = 650

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
 Frame = +3

Query: 363 SNRGDGKKF--------LPKGKNVATASSSDVDQLNQAVQDVNLDSSQ-DGSWEVFSKKN 515
           SN+G GK F         PKG NV+  S++  D L Q V DV+L+  Q DG WEV++KK+
Sbjct: 3   SNKGRGKTFNSSSNNERSPKGNNVSGTSTTTPDHLKQDVADVSLEPGQADGDWEVYAKKS 62

Query: 516 KNRTGNGASSK 548
           +N+ G  AS +
Sbjct: 63  RNKAGANASKQ 73


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