BLASTX nr result

ID: Atractylodes22_contig00003548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003548
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518012.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002872063.1| hypothetical protein ARALYDRAFT_489218 [Arab...    84   2e-14
ref|NP_197747.1| protein SUPPRESSOR OF GENE SILENCING 3 [Arabido...    81   1e-13
gb|ACN79519.1| reduced leaflet 1 [Lotus japonicus]                     79   5e-13

>ref|XP_002518012.1| conserved hypothetical protein [Ricinus communis]
           gi|223542994|gb|EEF44530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 634

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/142 (37%), Positives = 70/142 (49%), Gaps = 36/142 (25%)
 Frame = +1

Query: 145 SKGKNVARTSSSDVDRLNQAVQDVKLDSSQD-GSWEVFSKKYKNRTGNGAGSKPWGFQTG 321
           SKGKN +  SS  +++L+Q+V D+ LD+++D G WEV ++K KNR G+ A +KPWG Q  
Sbjct: 20  SKGKNSSHVSSPKLEQLSQSVADINLDATEDDGQWEVIARKTKNRAGSSA-AKPWGSQNS 78

Query: 322 -----------------------------------GRGSASNQQMNRYYENNYNAASTAI 396
                                              GRG+   Q  N   ENNY A    I
Sbjct: 79  NTKAWEHQDTVQKLGMRSNGGSGRMSGNTRPTQATGRGNTRPQSSNWGMENNYVAPQPTI 138

Query: 397 PPPLQSGWNWNSRPGNARHLGN 462
           PPPL+ GWNW SR G A   G+
Sbjct: 139 PPPLEHGWNWQSRFGAAAPKGS 160


>ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|222862585|gb|EEF00092.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 42/141 (29%)
 Frame = +1

Query: 145 SKGKNVARTSSSDVDRLNQAVQDVKLDSSQD-GSWEVFSKKYKNRTGNGAGSKPWGFQT- 318
           SKGKNVA  S   V++L+Q V D+ LDS QD G WEV +KK KNR G+ A +KPWG QT 
Sbjct: 20  SKGKNVAEASGPAVEQLSQGVADIGLDSVQDDGEWEVIAKKSKNRAGSSA-AKPWGSQTT 78

Query: 319 ----------------------------------------GGRGSASNQQMNRYYENNYN 378
                                                    GRG+A  Q  NR  ++NY 
Sbjct: 79  NNKAWGNPDVIQKLGMRNNGGSGRNPGNAWSTQPVDPRGPTGRGAARPQTFNRGMQSNYA 138

Query: 379 AASTAIPPPLQSGWNWNSRPG 441
           A    I PPL+ GW+W +R G
Sbjct: 139 APQPVIRPPLEHGWSWQARAG 159


>ref|XP_002872063.1| hypothetical protein ARALYDRAFT_489218 [Arabidopsis lyrata subsp.
           lyrata] gi|297317900|gb|EFH48322.1| hypothetical protein
           ARALYDRAFT_489218 [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 31/141 (21%)
 Frame = +1

Query: 124 SKRLGGQSKGKNVARTSSS-DVDRLNQAVQDVKLDSSQD--GSWEVFSKKYKNRTGNGAG 294
           S R G  SKGKNV++  S  +V++L Q +   KL  SQD  G WEV SKK KN+ GN +G
Sbjct: 2   SSRAGPMSKGKNVSQGGSKPEVEQLVQGLTGTKLAPSQDDGGEWEVISKKNKNKPGNTSG 61

Query: 295 S----------KPWGFQTGGRG------------------SASNQQMNRYYENNYNAAST 390
                      + WG Q  GRG                  S   + +++ Y+N++ A   
Sbjct: 62  KAWVSQNSNPPRAWGGQQQGRGNNVAGRGNGNGRGTQANISGRGRALSKKYDNHFVAPPP 121

Query: 391 AIPPPLQSGWNWNSRPGNARH 453
              PPL+ GWNW +R G+A+H
Sbjct: 122 VTRPPLEGGWNWQARGGSAQH 142


>ref|NP_197747.1| protein SUPPRESSOR OF GENE SILENCING 3 [Arabidopsis thaliana]
           gi|75173862|sp|Q9LDX1.1|SGS3_ARATH RecName: Full=Protein
           SUPPRESSOR OF GENE SILENCING 3; Short=AtSGS3
           gi|8164030|gb|AAF73960.1| SGS3 [Arabidopsis thaliana]
           gi|8809703|dbj|BAA97244.1| unnamed protein product
           [Arabidopsis thaliana] gi|27754623|gb|AAO22757.1|
           unknown protein [Arabidopsis thaliana]
           gi|28393933|gb|AAO42374.1| unknown protein [Arabidopsis
           thaliana] gi|332005801|gb|AED93184.1| protein SUPPRESSOR
           OF GENE SILENCING 3 [Arabidopsis thaliana]
          Length = 625

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/147 (34%), Positives = 68/147 (46%), Gaps = 37/147 (25%)
 Frame = +1

Query: 124 SKRLGGQSKGKNVARTSSSDVDRLNQAVQDVKLDSSQD--GSWEVFSKKYKNRTGNGAGS 297
           S R G  SK KNV      +V++L Q +   +L SSQD  G WEV SKK KN+ GN +G 
Sbjct: 2   SSRAGPMSKEKNVQGGYRPEVEQLVQGLAGTRLASSQDDGGEWEVISKKNKNKPGNTSGK 61

Query: 298 ----------KPWGFQTGGRGS-------------------------ASNQQMNRYYENN 372
                     + WG Q  GRGS                            + ++R Y+NN
Sbjct: 62  TWVSQNSNPPRAWGGQQQGRGSNVSGRGNNVSGRGNGNGRGIQANISGRGRALSRKYDNN 121

Query: 373 YNAASTAIPPPLQSGWNWNSRPGNARH 453
           + A      PPL+ GWNW +R G+A+H
Sbjct: 122 FVAPPPVSRPPLEGGWNWQARGGSAQH 148


>gb|ACN79519.1| reduced leaflet 1 [Lotus japonicus]
          Length = 642

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 57/154 (37%), Positives = 68/154 (44%), Gaps = 45/154 (29%)
 Frame = +1

Query: 118 MSSKRLGGQSKGKNVARTSSSDVDRLNQAVQDVKLDSSQD-GSWEVFSKKYKNRTGNGAG 294
           MSS+R GG SKGK +A  S + +++L Q V D  LD  QD G WEV+ KK KNR G+ A 
Sbjct: 1   MSSRR-GGVSKGKTIAE-SHAQIEQLTQGVADTNLDPGQDDGQWEVYGKKSKNRAGSSA- 57

Query: 295 SKPWGFQT-----------------------GGRGSASNQQMNRYYEN------------ 369
           +KPWG Q                        GG G AS         N            
Sbjct: 58  AKPWGSQAHNSNPRAWGNTNMAQKPGMQNLGGGAGRASGNPWQTQNANLRRPAGRGNGGP 117

Query: 370 --------NYNAAST-AIPPPLQSGWNWNSRPGN 444
                   NYN  S   I PPL+ GWNW SR G+
Sbjct: 118 QVPSTGYQNYNVTSNPLIRPPLEHGWNWQSRTGS 151


Top