BLASTX nr result

ID: Atractylodes22_contig00003521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003521
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]            106   2e-21
gb|AFK44850.1| unknown [Lotus japonicus]                              104   6e-21
gb|ABM30196.1| ribosomal large subunit structural protein [Brass...   103   1e-20
ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   103   1e-20
ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like...   103   2e-20

>dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]
          Length = 146

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = -3

Query: 386 VPQDVKDKASADKVPVVDVTQHGYFKVLGKGMVPPSHPMVVKAKLISKTAEKKIKEAGGS 207
           +PQ+ K+KA A   PV+DVTQHGYFKVLGKG +P SHP+VVKAKL+SKTAEKKIKEAGG+
Sbjct: 82  LPQEAKEKADAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKEAGGA 141

Query: 206 VLLTA 192
           V+LTA
Sbjct: 142 VVLTA 146


>gb|AFK44850.1| unknown [Lotus japonicus]
          Length = 146

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/65 (76%), Positives = 59/65 (90%)
 Frame = -3

Query: 386 VPQDVKDKASADKVPVVDVTQHGYFKVLGKGMVPPSHPMVVKAKLISKTAEKKIKEAGGS 207
           +PQDVKDKAS D  PVVDVTQ+GYFKVLGKG++P + P+VVKAKL+SK AEKKIKEAGG+
Sbjct: 82  LPQDVKDKASKDAAPVVDVTQYGYFKVLGKGVLPSNQPLVVKAKLVSKIAEKKIKEAGGA 141

Query: 206 VLLTA 192
           V+LTA
Sbjct: 142 VVLTA 146


>gb|ABM30196.1| ribosomal large subunit structural protein [Brassica juncea]
          Length = 146

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/65 (76%), Positives = 59/65 (90%)
 Frame = -3

Query: 386 VPQDVKDKASADKVPVVDVTQHGYFKVLGKGMVPPSHPMVVKAKLISKTAEKKIKEAGGS 207
           VP+DVK KA+ DKVP++DVTQHG+FKVLGKG +P + P VVKAKLISKTAEKKIKEAGG+
Sbjct: 82  VPEDVKAKATKDKVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGA 141

Query: 206 VLLTA 192
           V+LTA
Sbjct: 142 VVLTA 146


>ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147783378|emb|CAN59887.1| hypothetical protein
           VITISV_026169 [Vitis vinifera]
          Length = 146

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = -3

Query: 386 VPQDVKDKASADKVPVVDVTQHGYFKVLGKGMVPPSHPMVVKAKLISKTAEKKIKEAGGS 207
           VPQDVKDKAS D  P++DVTQ GYFKVLGKG +P S P+VVKAKL+SK AEKKIKEAGG+
Sbjct: 82  VPQDVKDKASPDNAPLIDVTQFGYFKVLGKGALPSSQPIVVKAKLVSKIAEKKIKEAGGA 141

Query: 206 VLLTA 192
           V+LTA
Sbjct: 142 VVLTA 146


>ref|XP_004135269.1| PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis sativus]
           gi|449521585|ref|XP_004167810.1| PREDICTED: 60S
           ribosomal protein L27a-3-like [Cucumis sativus]
          Length = 146

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/65 (75%), Positives = 59/65 (90%)
 Frame = -3

Query: 386 VPQDVKDKASADKVPVVDVTQHGYFKVLGKGMVPPSHPMVVKAKLISKTAEKKIKEAGGS 207
           +PQ+VKDKAS D VP+VDVTQ GYFKVLGKG++P + P+VVKAKL+SK AEKKIKEAGG+
Sbjct: 82  IPQEVKDKASKDNVPLVDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGA 141

Query: 206 VLLTA 192
           V+LTA
Sbjct: 142 VVLTA 146


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