BLASTX nr result

ID: Atractylodes22_contig00003462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003462
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAK24966.1| chlorophyll a/b binding protein [Solanum tuberosum]   184   1e-44
ref|XP_002514741.1| chlorophyll A/B binding protein, putative [R...   181   1e-43
gb|ACB05669.1| chloroplast chlorophyll a/b binding protein [Caps...   181   1e-43
gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK...   179   2e-43
ref|XP_002330127.1| light-harvesting complex I protein Lhca4 [Po...   177   2e-42

>emb|CAK24966.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 251

 Score =  184 bits (466), Expect = 1e-44
 Identities = 86/90 (95%), Positives = 87/90 (96%)
 Frame = +2

Query: 2   EAKKGQWLPGLPSPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNARWAMLGVAGM 181
           EAKKGQWLPGL SP YLDGSLPGDNGFDPLGLAEDPENLKWF+QAELVN RWAMLGVAGM
Sbjct: 50  EAKKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGM 109

Query: 182 LLPEVFTSIGILNVPKWYDAGKSEYFASSS 271
           LLPEVFTSIGILNVPKWYDAGKSEYFASSS
Sbjct: 110 LLPEVFTSIGILNVPKWYDAGKSEYFASSS 139



 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/64 (92%), Positives = 61/64 (95%)
 Frame = +1

Query: 403 SLPPHECGYPGSIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 582
           SLPP++CGYPG IFNPLNFAPT EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ
Sbjct: 176 SLPPNKCGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 235

Query: 583 HLSD 594
           HL D
Sbjct: 236 HLFD 239


>ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223546345|gb|EEF47847.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 251

 Score =  181 bits (458), Expect = 1e-43
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = +2

Query: 2   EAKKGQWLPGLPSPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNARWAMLGVAGM 181
           EAKKG+WLPGLPSP YL+GSLPGDNGFDPLGLAEDPENLKWFVQAELVN RWAMLGVAGM
Sbjct: 49  EAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGM 108

Query: 182 LLPEVFTSIGILNVPKWYDAGKSEYFASSS 271
           LLPEVFT IGI+NVPKWYDAGK EYFASSS
Sbjct: 109 LLPEVFTKIGIINVPKWYDAGKEEYFASSS 138



 Score =  125 bits (315), Expect = 4e-27
 Identities = 58/64 (90%), Positives = 61/64 (95%)
 Frame = +1

Query: 403 SLPPHECGYPGSIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 582
           SLPP+E GYPG IFNPLNFAPT EAKEKELANGRLAMLAFLGF++QHNVTGKGPFDNLLQ
Sbjct: 175 SLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQ 234

Query: 583 HLSD 594
           HLSD
Sbjct: 235 HLSD 238


>gb|ACB05669.1| chloroplast chlorophyll a/b binding protein [Capsicum annuum]
          Length = 250

 Score =  181 bits (458), Expect = 1e-43
 Identities = 83/90 (92%), Positives = 87/90 (96%)
 Frame = +2

Query: 2   EAKKGQWLPGLPSPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNARWAMLGVAGM 181
           EAKKG+WLPGL SP YLDGSLPGDNGFDPLGLAEDPENLKW++QAELVN RWAMLGVAGM
Sbjct: 48  EAKKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKWYIQAELVNGRWAMLGVAGM 107

Query: 182 LLPEVFTSIGILNVPKWYDAGKSEYFASSS 271
           LLPEVFTSIGILNVPKWYDAGK+EYFASSS
Sbjct: 108 LLPEVFTSIGILNVPKWYDAGKAEYFASSS 137



 Score =  127 bits (319), Expect = 1e-27
 Identities = 60/64 (93%), Positives = 61/64 (95%)
 Frame = +1

Query: 403 SLPPHECGYPGSIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 582
           SLPP+ECGYPG IFNPLNFA T EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ
Sbjct: 174 SLPPNECGYPGGIFNPLNFAATEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 233

Query: 583 HLSD 594
           HLSD
Sbjct: 234 HLSD 237


>gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK42004.1| unknown
           [Medicago truncatula]
          Length = 253

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = +2

Query: 2   EAKKGQWLPGLPSPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNARWAMLGVAGM 181
           EAKKG+WLPGL SPGYL GSLPGDNGFDPLGLAEDPENLKWFVQAELVN RWAMLGVAGM
Sbjct: 50  EAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGM 109

Query: 182 LLPEVFTSIGILNVPKWYDAGKSEYFASSS 271
           LLPEVFT+IGI+NVPKWYDAGK EYFASSS
Sbjct: 110 LLPEVFTNIGIINVPKWYDAGKEEYFASSS 139



 Score =  121 bits (303), Expect = 1e-25
 Identities = 57/64 (89%), Positives = 59/64 (92%)
 Frame = +1

Query: 403 SLPPHECGYPGSIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 582
           SLP  E GYPG IFNPLNFAPT EAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPFDNLLQ
Sbjct: 176 SLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQ 235

Query: 583 HLSD 594
           HLSD
Sbjct: 236 HLSD 239


>ref|XP_002330127.1| light-harvesting complex I protein Lhca4 [Populus trichocarpa]
           gi|222871261|gb|EEF08392.1| light-harvesting complex I
           protein Lhca4 [Populus trichocarpa]
          Length = 251

 Score =  177 bits (448), Expect = 2e-42
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = +2

Query: 2   EAKKGQWLPGLPSPGYLDGSLPGDNGFDPLGLAEDPENLKWFVQAELVNARWAMLGVAGM 181
           EAKKG+WLPGLPSP YL+GSLPGDNGFDPLGLAEDPENL+WFVQAELVN RWAMLGVAGM
Sbjct: 49  EAKKGEWLPGLPSPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGM 108

Query: 182 LLPEVFTSIGILNVPKWYDAGKSEYFASSS 271
           LLPEVFT IGI+N P+WYDAGK+EYFASSS
Sbjct: 109 LLPEVFTKIGIINAPQWYDAGKAEYFASSS 138



 Score =  127 bits (319), Expect = 1e-27
 Identities = 57/64 (89%), Positives = 62/64 (96%)
 Frame = +1

Query: 403 SLPPHECGYPGSIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQ 582
           SLPP+ECGYPG IFNPLNFAPT EAKEKELANGRLAMLAFLGF++QHNVTGKGPF+NLLQ
Sbjct: 175 SLPPNECGYPGGIFNPLNFAPTIEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQ 234

Query: 583 HLSD 594
           H+SD
Sbjct: 235 HISD 238


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