BLASTX nr result

ID: Atractylodes22_contig00003425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003425
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-li...   281   3e-73
ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g...   256   9e-66
ref|XP_002518880.1| zinc finger protein, putative [Ricinus commu...   249   1e-63
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...   238   1e-60
ref|XP_003536179.1| PREDICTED: dof zinc finger protein DOF4.6 [G...   233   5e-59

>ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 288

 Score =  281 bits (718), Expect = 3e-73
 Identities = 168/311 (54%), Positives = 198/311 (63%), Gaps = 11/311 (3%)
 Frame = -3

Query: 939 EIVVKPMEEIIVXXXXXXXXXXXXXXXXXXSFERRIRPQKAAAVNCPRCDSTNTKFCYYN 760
           EIVVKP+EEI+                     E+R RPQK  A+NCPRC+STNTKFCYYN
Sbjct: 9   EIVVKPLEEIVTNTCPKPA------------LEKRARPQKEQALNCPRCNSTNTKFCYYN 56

Query: 759 NYSLSQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRXXXXXXXXXXXXXXXXSKKLPD 580
           NYSLSQPRYFCK CRRYWTEGG+LRNIPVGGGSRKNKR                SKKLPD
Sbjct: 57  NYSLSQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKR---SSSSSSSSSSSASSKKLPD 113

Query: 579 -VPPALS----QNPRIHHGHYGQDLNLGFPSTNNFKNVSEFMQVPNFD-GXXXXXXXXXX 418
            VPP  S    QNP+IH    GQDLNL FP+  +F++VSEFMQ+P+ +            
Sbjct: 114 LVPPGCSQSSAQNPKIHE---GQDLNLSFPAAQDFRSVSEFMQMPSIENSNNNTNNSSKS 170

Query: 417 XXXXXXXXXXXXXALELLTGITTRGTINSFMPIPIPDPNSVYSPSGQLMIPMPEFKIPSL 238
                        ALELLTGIT+RG +NSFMP+PIPDPN+VY+       PM EFK P+L
Sbjct: 171 HITSTSSTSSHLSALELLTGITSRG-LNSFMPMPIPDPNTVYTTG----FPMQEFK-PTL 224

Query: 237 SFSLDGMTSGGTYGN-----ESTGGTLLFPFEELKTNTIPTTHDDPHVGQTRDQNGDSNG 73
           +FSLDG+ SG  YG+      S+ G LLFPFE+LK   + +T D  H+ QTR+Q GDS G
Sbjct: 225 NFSLDGLGSG--YGSIQGVQGSSSGRLLFPFEDLK--QVSSTAD--HIEQTREQ-GDSTG 277

Query: 72  FWNGMLGGGSW 40
           +W GMLGGGSW
Sbjct: 278 YWTGMLGGGSW 288


>ref|XP_002303678.1| f-box family protein [Populus trichocarpa]
           gi|222841110|gb|EEE78657.1| f-box family protein
           [Populus trichocarpa]
          Length = 279

 Score =  256 bits (653), Expect = 9e-66
 Identities = 154/308 (50%), Positives = 191/308 (62%), Gaps = 8/308 (2%)
 Frame = -3

Query: 939 EIVVKPMEEIIVXXXXXXXXXXXXXXXXXXSFERRIRPQKAAAVNCPRCDSTNTKFCYYN 760
           EIVVKP+EEI+                     ER+ RPQK  A+NCPRC+STNTKFCYYN
Sbjct: 9   EIVVKPIEEIVTNTCPKPPA-----------LERKARPQKEQALNCPRCNSTNTKFCYYN 57

Query: 759 NYSLSQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRXXXXXXXXXXXXXXXXSKKLPD 580
           NYSL+QPRYFCKTCRRYWTEGG+LRNIPVGGGSRKNKR                SKKLPD
Sbjct: 58  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR--------SSASSSSSSKKLPD 109

Query: 579 V--PPALS----QNPRIHHGHYGQDLNLGFPSTNNFKNVSEFMQVPNFDGXXXXXXXXXX 418
           +  P +LS    QNP+IH    GQDLNL FPST + ++ SE +QVP+ +           
Sbjct: 110 LITPTSLSQTSTQNPKIHE---GQDLNLAFPSTQSIRSFSELIQVPSIN--ENNNKNPIS 164

Query: 417 XXXXXXXXXXXXXALELLTGITTRGTINSFMPIPIPDPNSVYSPSGQLMIPMPEFKIPSL 238
                        ALELLTGI++RG +NSF P+P+ DP+++Y+ S     P+ +FK P+L
Sbjct: 165 SSTSASTTTSQLSALELLTGISSRG-LNSF-PMPVQDPSTLYTSS----FPLHDFK-PTL 217

Query: 237 SFSLDGMTS--GGTYGNESTGGTLLFPFEELKTNTIPTTHDDPHVGQTRDQNGDSNGFWN 64
           +FSLDG+ S  G   G + T G LLFPFE+LK   + +T D  H      ++GDS G+W 
Sbjct: 218 NFSLDGLGSCYGSLQGVQETNGRLLFPFEDLK--QVSSTADIEH----NKEHGDSTGYWT 271

Query: 63  GMLGGGSW 40
           GMLGGGSW
Sbjct: 272 GMLGGGSW 279


>ref|XP_002518880.1| zinc finger protein, putative [Ricinus communis]
           gi|223541867|gb|EEF43413.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 306

 Score =  249 bits (635), Expect = 1e-63
 Identities = 155/317 (48%), Positives = 189/317 (59%), Gaps = 17/317 (5%)
 Frame = -3

Query: 939 EIVVKPMEEIIVXXXXXXXXXXXXXXXXXXSFERRIRPQKAAAVNCPRCDSTNTKFCYYN 760
           EI+VKP+EE++                     ER+ RPQK  A+NCPRC+STNTKFCYYN
Sbjct: 9   EILVKPIEELVTNTCPKPASAAAAAA-----LERKSRPQKEQALNCPRCNSTNTKFCYYN 63

Query: 759 NYSLSQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKR----XXXXXXXXXXXXXXXXSK 592
           NYSL+QPRYFCKTCRRYWTEGG+LRNIPVGGGSRKNKR                    SK
Sbjct: 64  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSSSSLSTCSSNSSSSSSK 123

Query: 591 KLPD-VPPALS------QNPRIHHGHY--GQDLNLGFPSTNNFKNVSEFMQVPNFDGXXX 439
           KLPD V P +S      QNP  +      G DLNL FPST   ++ SE +QVP+ +    
Sbjct: 124 KLPDLVTPQISLSQSSTQNPNNNSNKIPEGHDLNLAFPSTQGIRSFSELIQVPSIN---E 180

Query: 438 XXXXXXXXXXXXXXXXXXXXALELLTGITTRGTINSFMPIPIPDPNSVYSPSGQLMIPMP 259
                               ALELLTGI++RG +NSFMP+P+ DPNSVY+       P+ 
Sbjct: 181 GNNNKNPSSTSNTTTSSQLSALELLTGISSRG-LNSFMPMPVQDPNSVYTSG----FPLQ 235

Query: 258 EFKIPSLSFSLDGMTS--GGTYGNESTGGTLLFPFEELKTNTIPTTHDDPHVGQTRDQNG 85
           +FK P+L+FSLDG+ S  G   G + TGG LLFPFE+LK   + +T  D  + Q R+Q G
Sbjct: 236 DFK-PTLNFSLDGLGSGYGSLQGVQETGGRLLFPFEDLK--QVSSTSTD--IEQNREQ-G 289

Query: 84  DSNGFWNGML--GGGSW 40
           DS G+W GML  GGGSW
Sbjct: 290 DSAGYWTGMLGGGGGSW 306


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score =  238 bits (608), Expect = 1e-60
 Identities = 148/306 (48%), Positives = 178/306 (58%), Gaps = 6/306 (1%)
 Frame = -3

Query: 939 EIVVKPMEEIIVXXXXXXXXXXXXXXXXXXSFERRIRPQKAAAVNCPRCDSTNTKFCYYN 760
           EIVVKP+EEI+V                    ER++RPQK  A+NCPRC+STNTKFCYYN
Sbjct: 9   EIVVKPIEEIVVNTCSKPPA-----------LERKVRPQKEQALNCPRCNSTNTKFCYYN 57

Query: 759 NYSLSQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRXXXXXXXXXXXXXXXXSKKLPD 580
           NYSL+QPRYFCKTCRRYWTEGG+LR+IPVGGGSRKNKR                SKKLPD
Sbjct: 58  NYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKR--------SSASSSSSSKKLPD 109

Query: 579 V--PPALSQNPRIHHG-HYGQDLNLGFPSTNNFKNVSEFMQVPNFDGXXXXXXXXXXXXX 409
           +  PP LSQ    +H  H GQDLNL FPST   +                          
Sbjct: 110 LISPPTLSQTSTENHKIHEGQDLNLAFPSTQGIRT------------------------- 144

Query: 408 XXXXXXXXXXALELLTGITTRGTINSFMPIPI-PDPNSVYSPSGQLMIPMPEFKIPSLSF 232
                      LELLTGI++RG +NSF P+P+  DP+++Y PSG    P+ +FK P+LSF
Sbjct: 145 -----------LELLTGISSRG-LNSF-PMPVHQDPSTLY-PSG---FPLQDFK-PTLSF 186

Query: 231 SLDGMTS--GGTYGNESTGGTLLFPFEELKTNTIPTTHDDPHVGQTRDQNGDSNGFWNGM 58
           SLDG+ S  G   G   T G LLFPFE+LK     T   + +      ++GDS G+W GM
Sbjct: 187 SLDGLGSGYGDLQGVHETNGRLLFPFEDLKQQVSSTADIEQN-----KEHGDSTGYWTGM 241

Query: 57  LGGGSW 40
           LGGGSW
Sbjct: 242 LGGGSW 247


>ref|XP_003536179.1| PREDICTED: dof zinc finger protein DOF4.6 [Glycine max]
          Length = 269

 Score =  233 bits (595), Expect = 5e-59
 Identities = 145/315 (46%), Positives = 169/315 (53%), Gaps = 15/315 (4%)
 Frame = -3

Query: 939 EIVVKPMEEIIVXXXXXXXXXXXXXXXXXXSFERRIRPQKAAAVNCPRCDSTNTKFCYYN 760
           E+VVKP+E+I+V                    ER+ RPQK  A+NCPRC S NTKFCYYN
Sbjct: 9   EMVVKPIEDIVVTNTTCTKAAVGSV-------ERKPRPQKEQAINCPRCHSINTKFCYYN 61

Query: 759 NYSLSQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRXXXXXXXXXXXXXXXXSKK--- 589
           NYSL+QPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKR                + K   
Sbjct: 62  NYSLTQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRSSASCSNNSHHNDNNSTNKKLS 121

Query: 588 --LPDVPPALS---QNPRIHHG---HYGQDLNLGFPSTNNFKNVSEFMQVPNFDGXXXXX 433
             L   PP LS   QNP+ +     H GQDLNL FPST N                    
Sbjct: 122 ADLVITPPTLSHTTQNPKSNDNSIIHQGQDLNLAFPSTTNLS------------------ 163

Query: 432 XXXXXXXXXXXXXXXXXXALELLTGIT---TRGTINSFMPIPIP-DPNSVYSPSGQLMIP 265
                             ALELLTGIT   + G   SFMPIP+P +PNS+Y+       P
Sbjct: 164 ------------------ALELLTGITSSSSTGLSTSFMPIPVPSNPNSIYTCG----FP 201

Query: 264 MPEFKIPSLSFSLDGMTSGGTYGNESTGGTLLFPFEELKTNTIPTTHDDPHVGQTRDQNG 85
           + +FK  +L+FSLDG+  G T      GG LLFPFE+LK  +  TT         + Q G
Sbjct: 202 LQDFKPGTLNFSLDGIGKGYTSLQNVHGGRLLFPFEDLKQVSSTTT-------MNQTQQG 254

Query: 84  DSNGFWNGMLGGGSW 40
           DS G+W GMLGGGSW
Sbjct: 255 DSTGYWTGMLGGGSW 269


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