BLASTX nr result

ID: Atractylodes22_contig00003422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003422
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521101.1| conserved hypothetical protein [Ricinus comm...   325   2e-86
gb|AFK45695.1| unknown [Medicago truncatula]                          319   1e-84
ref|XP_003530871.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   316   1e-83
ref|XP_003575379.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   293   6e-77
ref|XP_003575380.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   292   1e-76

>ref|XP_002521101.1| conserved hypothetical protein [Ricinus communis]
            gi|223539670|gb|EEF41252.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 399

 Score =  325 bits (832), Expect = 2e-86
 Identities = 171/406 (42%), Positives = 233/406 (57%), Gaps = 20/406 (4%)
 Frame = -2

Query: 1408 ESDQISDNFTCAVCLDVLYKPIVLVCGHVSCFWCCQRSMRMKSESHCPLCRHPYHHFPAI 1229
            ES++I D+F C +CLD+L+KPIVL CGHVSCFWC  +SM  + ES CP+CRHPY+HFP +
Sbjct: 3    ESEKIPDSFLCCICLDLLFKPIVLACGHVSCFWCVHKSMSGRRESCCPICRHPYNHFPTV 62

Query: 1228 CLTLHFLLKKLYPISYNRRNIQTLEEEKQ-STLGSSTDIDSLVTSEGS--NHLNNVGQSS 1058
               LH LL  +YPI+Y RR    L EEKQ        D  +  + E    +HL +    S
Sbjct: 63   SQMLHALLFNIYPIAYKRREELILAEEKQMGYFSPQFDYTACQSPENQEYDHLKDHEHLS 122

Query: 1057 DVSFEDAFLVDPXXXXXXXXXXXXTGARKQVTVNDVLCPACKQLLFRPVVLNCGHVYCEA 878
              S E     D              G  K++++ DVLC ACKQL+FRPV LNCG  YCE+
Sbjct: 123  TTSLES----DSCSETCSTREGEPKGKSKRLSITDVLCAACKQLVFRPVFLNCGQGYCES 178

Query: 877  CI--TIPTEGIIKCQVCECRHPSGFPKVCRELDHFIEEQLSSEYALRRSTTQLNQEKTQN 704
            CI  ++   G+++CQVC   HP+GFPKVC ELDHF+E+Q   +YA+RR   +L Q   + 
Sbjct: 179  CISCSVDENGMLRCQVCHSLHPTGFPKVCLELDHFLEDQFPRDYAMRRDAVELKQANIKI 238

Query: 703  RNSLNDATTIVPRLSFPTNENFLQWWNVHSSRFHYSVGCDMCGMCPIVGERYRCKDCTEK 524
             N ++         S P  E       +   + H+ VGCD CG+ PI+G+RYRCKDC EK
Sbjct: 239  ENPISSGKKGFSFSSMPKEE-------LSHLKLHFGVGCDFCGIYPIIGDRYRCKDCVEK 291

Query: 523  CGYDLCGDCYSTGSNLRGRFNQKHTPQHQLELV-----KPVIYGLLNGQVAVVSSIASRH 359
             G+DLCGDCY+T S   GRFNQ+HTP+H+ E V     + VI  L+N Q    S + +  
Sbjct: 292  IGFDLCGDCYNTRSKRPGRFNQQHTPEHKFEHVDSINGRRVIRRLMNDQFGNTSPVLANP 351

Query: 358  ---QSSPANASP-SLDEDGVAGG------STELPSATREDESDNQA 251
                  P N  P SL   G   G      +T + + + +D++++Q+
Sbjct: 352  GDLSDVPENEFPSSLISVGADEGTRNTAMATVIHTGSADDQNESQS 397


>gb|AFK45695.1| unknown [Medicago truncatula]
          Length = 410

 Score =  319 bits (818), Expect = 1e-84
 Identities = 161/373 (43%), Positives = 212/373 (56%), Gaps = 28/373 (7%)
 Frame = -2

Query: 1423 MEEGTESDQISDNFTCAVCLDVLYKPIVLVCGHVSCFWCCQRSMRMKSESHCPLCRHPYH 1244
            ++     ++I D+F C VCLD+LYKPIVL CGH+ CFWC  +SM    ES CP CRH Y+
Sbjct: 9    LDHDEHEEEIPDSFCCCVCLDLLYKPIVLSCGHMRCFWCIHKSMSGVRESKCPTCRHQYY 68

Query: 1243 HFPAICLTLHFLLKKLYPISYNRRNIQTLEEEKQS----------TLGSSTDIDSLVTSE 1094
            HFP +C  LHFLL KLYP++YNRR  QTLEEEK+S          T  S        +  
Sbjct: 69   HFPTVCQLLHFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQFDFDTCESQAKFGHSCSPS 128

Query: 1093 GSNHLNNVGQSSDVSFEDAFLVDPXXXXXXXXXXXXTGAR-------------KQVTVND 953
             S+ +N V  SS+V   +   +D             TG R             ++++V D
Sbjct: 129  SSSTINLVSNSSNVGTSEC--MDQPGSTPHEGEPEITGTRVEEKALPLDNLTQQKISVAD 186

Query: 952  VLCPACKQLLFRPVVLNCGHVYCEACITIPTEGIIKCQVCECRHPSGFPKVCRELDHFIE 773
            V+C  CKQLLF  VVL+CGHVYCE C+    + +++CQVC+  HP GFPKVC E DHF+E
Sbjct: 187  VMCTMCKQLLFHHVVLHCGHVYCETCVYKLADEMLRCQVCQIPHPRGFPKVCLEFDHFLE 246

Query: 772  EQLSSEYALRRSTTQLNQEKTQNRNSLNDATTIVPRLSFPTNENFLQWWNVHSSRFHYSV 593
            EQ   EYA R    +L   K      L   T+    L        ++W +   S+ H+ V
Sbjct: 247  EQFPEEYAQRTDAIELKDVK------LKPKTSSSCLLDNGNQGENMEWLSDPDSKAHFGV 300

Query: 592  GCDMCGMCPIVGERYRCKDCTEKCGYDLCGDCYSTGSNLRGRFNQKHTPQHQLELVKP-- 419
            GCD CG+ PI+G RY+C DC EK G+DLCGDCY + S L GRFNQ+HT  H  +LV+P  
Sbjct: 301  GCDFCGVLPIIGNRYKCNDCKEKIGFDLCGDCYDSRSKLPGRFNQQHTSDHSFKLVEPDP 360

Query: 418  ---VIYGLLNGQV 389
               ++  L+ GQ+
Sbjct: 361  RRNIMLRLITGQL 373


>ref|XP_003530871.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Glycine max]
          Length = 394

 Score =  316 bits (809), Expect = 1e-83
 Identities = 159/354 (44%), Positives = 208/354 (58%), Gaps = 10/354 (2%)
 Frame = -2

Query: 1444 NRDRRSAMEEGTESDQISDNFTCAVCLDVLYKPIVLVCGHVSCFWCCQRSMRMKSESHCP 1265
            N   R  + E  E +++ D+F C VCLD+LYKPIVL CGH+ CFWC   SM    ES CP
Sbjct: 3    NNAFRDQIMEDNEHEEMPDSFVCCVCLDLLYKPIVLSCGHMCCFWCVYNSMSCLRESQCP 62

Query: 1264 LCRHPYHHFPAICLTLHFLLKKLYPISYNRRNIQTLEEEKQSTLGS-STDIDSLVTSEGS 1088
            +CR+ Y+HFP +C  LHFLL K+Y  +Y RR  QTLEEEK+S   S   D D+  +    
Sbjct: 63   VCRNQYYHFPTVCQLLHFLLLKIYTAAYKRRESQTLEEEKKSGFYSPQFDPDTCESQAKF 122

Query: 1087 NHLNNVGQSSD-----VSFEDAFLVDPXXXXXXXXXXXXTGARKQVTVNDVLCPACKQLL 923
             H  +     D      + E   +  P               +++++V DV C  CKQLL
Sbjct: 123  GHSGSTANEGDEGTIFSNREPDIIGTP--AKGKKLPQEELSLQQKLSVADVTCTMCKQLL 180

Query: 922  FRPVVLNCGHVYCEACITIPTEGIIKCQVCECRHPSGFPKVCRELDHFIEEQLSSEYALR 743
            F PVVLNCGHVYC+ C+    + +++C+VC+  HP G PKVC ELDHF+EEQ   EY  R
Sbjct: 181  FHPVVLNCGHVYCQICVINIDDEMLRCKVCQSPHPRGLPKVCLELDHFLEEQFPEEYGQR 240

Query: 742  RSTTQLNQEK----TQNRNSLNDATTIVPRLSFPTNENFLQWWNVHSSRFHYSVGCDMCG 575
            R   +L Q K    T +  SL+           P N +   WW+   S+ H  VGCD CG
Sbjct: 241  RDAIELQQIKVKPDTPSSCSLDGGKK-------PENTD---WWSDPDSKVHIGVGCDFCG 290

Query: 574  MCPIVGERYRCKDCTEKCGYDLCGDCYSTGSNLRGRFNQKHTPQHQLELVKPVI 413
            M PI+G+RYRC DC EK G+DLCGDCY++ S L GRFNQ+HT +H+ +LV+P I
Sbjct: 291  MFPIIGDRYRCIDCKEKMGFDLCGDCYASRSKLPGRFNQQHTSEHKFKLVQPNI 344


>ref|XP_003575379.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform 1
            [Brachypodium distachyon]
          Length = 391

 Score =  293 bits (751), Expect = 6e-77
 Identities = 143/345 (41%), Positives = 192/345 (55%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1438 DRRSAMEEGTESDQISD-NFTCAVCLDVLYKPIVLVCGHVSCFWCCQRSMRMKSESHCPL 1262
            +++  +  G   D + D  F C VCL++LYKP+V+ CGH+SCFWC  ++M    ESHC +
Sbjct: 13   EKKEEVAAGAGFDDLEDPRFQCCVCLELLYKPVVIGCGHMSCFWCVHKAMHFVRESHCAI 72

Query: 1261 CRHPYHHFPAICLTLHFLLKKLYPISYNRRNIQTLEEEKQSTLGSSTDIDSLVTSEGSNH 1082
            CR PY+HFP+IC  LH LL KL P+ Y +R  + LE+EK      S D  S    E  N 
Sbjct: 73   CRQPYNHFPSICQLLHHLLLKLEPVEYKKREKEVLEQEK------SVDTYSPQIIEFLNS 126

Query: 1081 LNNVGQSSDVSFEDAFLVDPXXXXXXXXXXXXTGARKQVTVNDVLCPACKQLLFRPVVLN 902
             +N  +  D   ED                   G  K++ + DV C  CK+LL++P VLN
Sbjct: 127  KDNNCEDGDSKLEDNI---SKTTPEVPVDNAINGHPKKIKLEDVSCARCKELLYQPAVLN 183

Query: 901  CGHVYCEACITIPTEGIIKCQVCECRHPSGFPKVCRELDHFIEEQLSSEYALRRSTTQLN 722
            CGHVYC +C+    +  +KCQVC   HP GFP VC +L+HF+EE    EY  RR   Q  
Sbjct: 184  CGHVYCMSCLPFLDDEALKCQVCGGLHPGGFPNVCLDLEHFLEEYFPEEYESRRRKLQFG 243

Query: 721  QEKTQNRNSLNDATTIVPRLSFPTNENFLQWWNVHSSRFHYSVGCDMCGMCPIVGERYRC 542
              +     S          ++ P+ +      N   S  H  VGCD CG+ PI G+RY+C
Sbjct: 244  ITQCTPEGSSPGTFCTKESMNRPSKQETYLQQNRDLSNVHVGVGCDSCGVYPIQGKRYKC 303

Query: 541  KDCTEKCGYDLCGDCYSTGSNLRGRFNQKHTPQHQLELVKPVIYG 407
            KDCTE  G+DLC +CY+T S L GRFNQ+HTP H++EL    +YG
Sbjct: 304  KDCTELVGFDLCDECYNTRSKLPGRFNQQHTPDHRMELDNTALYG 348


>ref|XP_003575380.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like isoform 2
            [Brachypodium distachyon]
          Length = 385

 Score =  292 bits (748), Expect = 1e-76
 Identities = 149/349 (42%), Positives = 196/349 (56%), Gaps = 5/349 (1%)
 Frame = -2

Query: 1438 DRRSAMEEGTESDQISD-NFTCAVCLDVLYKPIVLVCGHVSCFWCCQRSMRMKSESHCPL 1262
            +++  +  G   D + D  F C VCL++LYKP+V+ CGH+SCFWC  ++M    ESHC +
Sbjct: 13   EKKEEVAAGAGFDDLEDPRFQCCVCLELLYKPVVIGCGHMSCFWCVHKAMHFVRESHCAI 72

Query: 1261 CRHPYHHFPAICLTLHFLLKKLYPISYNRRNIQTLEEEKQSTLGSSTDIDSLVTSEGSNH 1082
            CR PY+HFP+IC  LH LL KL P+ Y +R  + LE+EK S    S  I   + S+ +N 
Sbjct: 73   CRQPYNHFPSICQLLHHLLLKLEPVEYKKREKEVLEQEK-SVDTYSPQIIEFLNSKDNNC 131

Query: 1081 LNNVGQSSDVSFEDAFLVDPXXXXXXXXXXXXTGARKQVTVNDVLCPACKQLLFRPVVLN 902
             N  G+  D   ED                   G  K++ + DV C  CK+LL++P VLN
Sbjct: 132  EN--GEDGDSKLEDNI---SKTTPEVPVDNAINGHPKKIKLEDVSCARCKELLYQPAVLN 186

Query: 901  CGHVYCEACITIPTEGIIKCQVCECRHPSGFPKVCRELDHFIEEQLSSEYALRRSTTQLN 722
            CGHVYC +C+    +  +KCQVC   HP GFP VC +L+HF+EE    EY  RR   Q  
Sbjct: 187  CGHVYCMSCLPFLDDEALKCQVCGGLHPGGFPNVCLDLEHFLEEYFPEEYESRRRKLQFG 246

Query: 721  QEKTQNRNSLNDATTIVPRLSFP----TNENFLQWWNVHSSRFHYSVGCDMCGMCPIVGE 554
                         T   P  S P      E +LQ  N   S  H  VGCD CG+ PI G+
Sbjct: 247  ------------ITQCTPEGSSPGKPSKQETYLQ-QNRDLSNVHVGVGCDSCGVYPIQGK 293

Query: 553  RYRCKDCTEKCGYDLCGDCYSTGSNLRGRFNQKHTPQHQLELVKPVIYG 407
            RY+CKDCTE  G+DLC +CY+T S L GRFNQ+HTP H++EL    +YG
Sbjct: 294  RYKCKDCTELVGFDLCDECYNTRSKLPGRFNQQHTPDHRMELDNTALYG 342


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