BLASTX nr result

ID: Atractylodes22_contig00003399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003399
         (1899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein lig...   385   e-104
ref|XP_002326350.1| predicted protein [Populus trichocarpa] gi|2...   376   e-101
ref|XP_002280999.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   372   e-100
emb|CAN69886.1| hypothetical protein VITISV_005072 [Vitis vinifera]   372   e-100
ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   366   1e-98

>ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus] gi|449513666|ref|XP_004164388.1| PREDICTED:
            probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus]
          Length = 368

 Score =  385 bits (989), Expect = e-104
 Identities = 191/251 (76%), Positives = 215/251 (85%), Gaps = 11/251 (4%)
 Frame = +3

Query: 696  TPYVDHQKAVTIRNDVNLKKETLKIEADEENPGKYLVSFTFDATVACSITLYFFAKEGED 875
            TPYV+HQKAVTIRNDVNLKKETLK+E DEENPG++LVSFTFDATVA SIT++FFAKEGED
Sbjct: 117  TPYVEHQKAVTIRNDVNLKKETLKVEPDEENPGQFLVSFTFDATVAGSITIFFFAKEGED 176

Query: 876  CNLMAVEEESHPPISVSFQQGLGQKFRQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAE 1055
            CNL  V+E+   PI+V F+QGLGQKFRQ  GTGID S +EE+E  K N+ ++YPL VKAE
Sbjct: 177  CNLTPVKEDIFQPITVHFEQGLGQKFRQPSGTGIDFSKFEESEFLKVNDTDVYPLVVKAE 236

Query: 1056 AT------EDGNGV---TNSQITDAVFEKDKGVYKVRVVKQILWVNGIRYELQEIYGIGN 1208
            A+       DG  V    NSQIT AVFEKDKG Y+VRV+KQILWVNG+RYELQEIYGIGN
Sbjct: 237  ASTDTQTGPDGTPVPDPMNSQITQAVFEKDKGEYQVRVLKQILWVNGMRYELQEIYGIGN 296

Query: 1209 S--GDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERL 1382
            S  GD DGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPV+RL
Sbjct: 297  SVEGDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVDRL 356

Query: 1383 LEIKVNNGAQD 1415
            LEI+V+NG ++
Sbjct: 357  LEIRVSNGPEE 367


>ref|XP_002326350.1| predicted protein [Populus trichocarpa] gi|222833543|gb|EEE72020.1|
            predicted protein [Populus trichocarpa]
          Length = 284

 Score =  376 bits (965), Expect = e-101
 Identities = 189/250 (75%), Positives = 209/250 (83%), Gaps = 11/250 (4%)
 Frame = +3

Query: 699  PYVDHQKAVTIRNDVNLKKETLKIEADEENPGKYLVSFTFDATVACSITLYFFAKEGEDC 878
            PYV+HQKAVTIRNDVNLKKE+L+IE DEENPG YLV+FTFDATVA SIT+ FFAKEGEDC
Sbjct: 35   PYVEHQKAVTIRNDVNLKKESLRIEPDEENPGSYLVTFTFDATVAGSITIIFFAKEGEDC 94

Query: 879  NLMAVEEESHPPISVSFQQGLGQKFRQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAEA 1058
             L   +    PP++V+FQQGLGQKFRQ  GTGID + +EE E  K  EM+ YPLAVKAEA
Sbjct: 95   ILTPTKAYLLPPVTVNFQQGLGQKFRQPSGTGIDFTLFEEKELVKEGEMDAYPLAVKAEA 154

Query: 1059 T------EDGN---GVTNSQITDAVFEKDKGVYKVRVVKQILWVNGIRYELQEIYGIGNS 1211
            +       +GN   G TNSQIT AVFEK+KG Y+VRV+KQILWVNGIRYELQEIYGIG+S
Sbjct: 155  SPANRKGTEGNQMSGATNSQITHAVFEKEKGEYQVRVMKQILWVNGIRYELQEIYGIGDS 214

Query: 1212 --GDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 1385
              GD D NDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPV+RLL
Sbjct: 215  VDGDVDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVDRLL 274

Query: 1386 EIKVNNGAQD 1415
            EIKVNNG  +
Sbjct: 275  EIKVNNGPDE 284


>ref|XP_002280999.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Vitis vinifera]
          Length = 362

 Score =  372 bits (956), Expect = e-100
 Identities = 187/250 (74%), Positives = 212/250 (84%), Gaps = 11/250 (4%)
 Frame = +3

Query: 699  PYVDHQKAVTIRNDVNLKKETLKIEADEENPGKYLVSFTFDATVACSITLYFFAKEGEDC 878
            PYV+HQKAVTIRNDVNLKKETL++E DEE+PG++LV+FTFDATV  SIT+ FFAKEGEDC
Sbjct: 114  PYVEHQKAVTIRNDVNLKKETLRLEPDEEHPGRFLVAFTFDATVPGSITIIFFAKEGEDC 173

Query: 879  NLMAVEEESHPPISVSFQQGLGQKFRQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAEA 1058
            +L  ++E   P ++V FQQGLGQKFRQ  GTGID ST+EE+E  K  +M++YPL VKAEA
Sbjct: 174  SLSPMKENLEP-VTVHFQQGLGQKFRQPTGTGIDFSTFEESELLKEGDMDVYPLEVKAEA 232

Query: 1059 TE------DGN---GVTNSQITDAVFEKDKGVYKVRVVKQILWVNGIRYELQEIYGIGNS 1211
            +       DGN   G  NSQIT AVFEK+KG Y+VRVVKQILWVNG+RYELQEIYGIGNS
Sbjct: 233  SPINQIGADGNPIPGTMNSQITKAVFEKEKGEYQVRVVKQILWVNGMRYELQEIYGIGNS 292

Query: 1212 --GDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 1385
              GDFD NDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQT+RCPICRQ VERLL
Sbjct: 293  VDGDFDSNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTDRCPICRQLVERLL 352

Query: 1386 EIKVNNGAQD 1415
            EIKV+NG+ D
Sbjct: 353  EIKVSNGSDD 362


>emb|CAN69886.1| hypothetical protein VITISV_005072 [Vitis vinifera]
          Length = 292

 Score =  372 bits (956), Expect = e-100
 Identities = 187/250 (74%), Positives = 212/250 (84%), Gaps = 11/250 (4%)
 Frame = +3

Query: 699  PYVDHQKAVTIRNDVNLKKETLKIEADEENPGKYLVSFTFDATVACSITLYFFAKEGEDC 878
            PYV+HQKAVTIRNDVNLKKETL++E DEE+PG++LV+FTFDATV  SIT+ FFAKEGEDC
Sbjct: 44   PYVEHQKAVTIRNDVNLKKETLRLEPDEEHPGRFLVAFTFDATVPGSITIIFFAKEGEDC 103

Query: 879  NLMAVEEESHPPISVSFQQGLGQKFRQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAEA 1058
            +L  ++E   P ++V FQQGLGQKFRQ  GTGID ST+EE+E  K  +M++YPL VKAEA
Sbjct: 104  SLSPMKENLEP-VTVHFQQGLGQKFRQPTGTGIDFSTFEESELLKEGDMDVYPLEVKAEA 162

Query: 1059 TE------DGN---GVTNSQITDAVFEKDKGVYKVRVVKQILWVNGIRYELQEIYGIGNS 1211
            +       DGN   G  NSQIT AVFEK+KG Y+VRVVKQILWVNG+RYELQEIYGIGNS
Sbjct: 163  SPINQIGADGNPIPGTMNSQITKAVFEKEKGEYQVRVVKQILWVNGMRYELQEIYGIGNS 222

Query: 1212 --GDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLL 1385
              GDFD NDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQT+RCPICRQ VERLL
Sbjct: 223  VDGDFDSNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTDRCPICRQLVERLL 282

Query: 1386 EIKVNNGAQD 1415
            EIKV+NG+ D
Sbjct: 283  EIKVSNGSDD 292


>ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 349

 Score =  366 bits (939), Expect = 1e-98
 Identities = 177/246 (71%), Positives = 208/246 (84%), Gaps = 13/246 (5%)
 Frame = +3

Query: 699  PYVDHQKAVTIRNDVNLKKETLKIEADEENPGKYLVSFTFDATVACSITLYFFAKEGEDC 878
            PYV+HQKAVTI+NDVN+KKETL+IE D+ENPG++LVSFTFDATV+ SIT+ FFAKEGE C
Sbjct: 98   PYVEHQKAVTIKNDVNIKKETLRIEPDDENPGRFLVSFTFDATVSGSITILFFAKEGEGC 157

Query: 879  NLMAVEEESHPPISVSFQQGLGQKFRQTPGTGIDLSTYEEAESSKGNEMNIYPLAVKAEA 1058
             L  ++E   PP++V+FQQGLGQKF+Q  GTGID ST+EE+E  K  +M++YP+A+KA+A
Sbjct: 158  TLTPMKENVLPPVTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKVGDMDVYPVAIKADA 217

Query: 1059 TED-----------GNGVTNSQITDAVFEKDKGVYKVRVVKQILWVNGIRYELQEIYGIG 1205
            +              +G +NSQIT AVFEK+KG ++V+VVKQILWVNG+RYELQEIYGIG
Sbjct: 218  SSSDHDESKSNETPSSGSSNSQITQAVFEKEKGEFQVKVVKQILWVNGMRYELQEIYGIG 277

Query: 1206 NS--GDFDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVER 1379
            NS   D DGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVER
Sbjct: 278  NSVESDVDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVER 337

Query: 1380 LLEIKV 1397
            LLEIKV
Sbjct: 338  LLEIKV 343


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