BLASTX nr result

ID: Atractylodes22_contig00003393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003393
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525389.1| catalytic, putative [Ricinus communis] gi|22...    38   4e-06
emb|CBI32143.3| unnamed protein product [Vitis vinifera]               42   4e-06

>ref|XP_002525389.1| catalytic, putative [Ricinus communis] gi|223535352|gb|EEF37027.1|
           catalytic, putative [Ricinus communis]
          Length = 861

 Score = 38.1 bits (87), Expect(3) = 4e-06
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +1

Query: 166 LVRVYSKKPQLVEVVFESFENFQPNTW 246
           +VRVY+KKP+LV+ V  +FENFQ  T+
Sbjct: 814 IVRVYAKKPELVDAVSVAFENFQQKTY 840



 Score = 31.2 bits (69), Expect(3) = 4e-06
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 242 HGMRAQVHGTPKRKRSRMFSCS 307
           +GM+AQVH TP +KR +   CS
Sbjct: 840 YGMKAQVHATPDKKRRKNLFCS 861



 Score = 25.4 bits (54), Expect(3) = 4e-06
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 87  EDSNSKK*FPISKDQISNLLPTCNQ 161
           +D  SK  F I KD IS+LLP+  Q
Sbjct: 787 QDYASKSKFTIEKDLISHLLPSSYQ 811


>emb|CBI32143.3| unnamed protein product [Vitis vinifera]
          Length = 473

 Score = 42.4 bits (98), Expect(3) = 4e-06
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +1

Query: 166 LVRVYSKKPQLVEVVFESFENFQPNTW 246
           +VRVYSKKP+LVE V E+FENFQ  T+
Sbjct: 425 IVRVYSKKPELVEAVSEAFENFQLKTY 451



 Score = 26.9 bits (58), Expect(3) = 4e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 248 MRAQVHGTPKRKRSRMF 298
           M+AQVH TP++K+ R F
Sbjct: 453 MKAQVHDTPEKKKRRSF 469



 Score = 25.4 bits (54), Expect(3) = 4e-06
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = +3

Query: 51  LKRERVNHIKLV----EDSNSKK*FPISKDQISNLLP 149
           L R R N ++ +    +D  S + FPI  D+IS+LLP
Sbjct: 382 LTRGRNNPLESIKFFKQDFESDEKFPIQDDRISHLLP 418


Top