BLASTX nr result
ID: Atractylodes22_contig00003378
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00003378
(784 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176910.1| 60S ribosomal protein L17-2 [Arabidopsis thalia... 209 6e-55
gb|AAL09401.1|AF307336_1 ribosomal protein [Petunia x hybrida] 208 1e-54
gb|ABK93299.1| unknown [Populus trichocarpa] gi|118483053|gb|ABK... 205 1e-53
gb|AEC10957.1| ribosomal petrp-like protein [Camellia sinensis] 210 2e-53
emb|CBI15653.3| unnamed protein product [Vitis vinifera] 204 2e-53
>ref|NP_176910.1| 60S ribosomal protein L17-2 [Arabidopsis thaliana]
gi|297838479|ref|XP_002887121.1| 60S ribosomal protein
L17 [Arabidopsis lyrata subsp. lyrata]
gi|27735241|sp|P51413.2|RL172_ARATH RecName: Full=60S
ribosomal protein L17-2 gi|3176668|gb|AAC18792.1|
Similar to ribosomal protein L17 gb|X62724 from Hordeum
vulgare. ESTs gb|Z34728, gb|F19974, gb|T75677 and
gb|Z33937 come from this gene [Arabidopsis thaliana]
gi|14596149|gb|AAK68802.1| ribosomal protein L17-like
protein [Arabidopsis thaliana]
gi|20148391|gb|AAM10086.1| unknown protein [Arabidopsis
thaliana] gi|110736681|dbj|BAF00304.1| ribosomal protein
L17-like protein [Arabidopsis thaliana]
gi|297332962|gb|EFH63380.1| 60S ribosomal protein L17
[Arabidopsis lyrata subsp. lyrata]
gi|332196523|gb|AEE34644.1| 60S ribosomal protein L17-2
[Arabidopsis thaliana]
Length = 175
Score = 209 bits (532), Expect(2) = 6e-55
Identities = 100/107 (93%), Positives = 105/107 (98%)
Frame = -1
Query: 700 MVKYSKEPENPTKSCKARGSDLRCHFKNTRETAHAIRKLPLIKAKRYLEDVLAHKQAIPF 521
MVKYS+EP+N TKSCKARGSDLR HFKNTRETAHAIRKLPLIKAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60
Query: 520 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG 380
TRFCRGVGRTAQAKNRHSNGQGRWPAKSA+F+LDLLKNAESNAEVKG
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKG 107
Score = 31.6 bits (70), Expect(2) = 6e-55
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -2
Query: 273 PCHIELTLSXXXXXXXXXXETQLAPRSKKNQA 178
PCHIEL LS ETQLA +SKK+ A
Sbjct: 144 PCHIELILSEKEEPVKKEPETQLAAKSKKSAA 175
>gb|AAL09401.1|AF307336_1 ribosomal protein [Petunia x hybrida]
Length = 175
Score = 208 bits (530), Expect(2) = 1e-54
Identities = 100/107 (93%), Positives = 103/107 (96%)
Frame = -1
Query: 700 MVKYSKEPENPTKSCKARGSDLRCHFKNTRETAHAIRKLPLIKAKRYLEDVLAHKQAIPF 521
MVKYS+EPENPTKSCKARGSDLR HFKNTRETAHA+RK+PL KAKRYLEDVLAHKQAIPF
Sbjct: 1 MVKYSREPENPTKSCKARGSDLRVHFKNTRETAHALRKMPLGKAKRYLEDVLAHKQAIPF 60
Query: 520 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG 380
TRFCRGVGRTAQAKNRHSNGQGRWP KSA FILDLLKNAESNAEVKG
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPVKSANFILDLLKNAESNAEVKG 107
Score = 31.2 bits (69), Expect(2) = 1e-54
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = -2
Query: 273 PCHIELTLSXXXXXXXXXXETQLAPRSKKNQA 178
PCHIEL LS ETQLAPR K A
Sbjct: 144 PCHIELILSEKEESVRKEPETQLAPRKTKASA 175
>gb|ABK93299.1| unknown [Populus trichocarpa] gi|118483053|gb|ABK93436.1| unknown
[Populus trichocarpa] gi|118483119|gb|ABK93468.1|
unknown [Populus trichocarpa]
gi|118483283|gb|ABK93544.1| unknown [Populus
trichocarpa] gi|118489714|gb|ABK96658.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 178
Score = 205 bits (521), Expect(2) = 1e-53
Identities = 98/107 (91%), Positives = 103/107 (96%)
Frame = -1
Query: 700 MVKYSKEPENPTKSCKARGSDLRCHFKNTRETAHAIRKLPLIKAKRYLEDVLAHKQAIPF 521
MVKYS+EP+NPTKSCKARGSDLR HFKNTRETA A+RKLPL+KAKRYLEDV+AHKQAIPF
Sbjct: 1 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFALRKLPLVKAKRYLEDVMAHKQAIPF 60
Query: 520 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG 380
RFC GVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG
Sbjct: 61 RRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG 107
Score = 31.6 bits (70), Expect(2) = 1e-53
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 273 PCHIELTLSXXXXXXXXXXETQLA-PRSKKNQA 178
PCHIELTLS ETQLA +SKK+QA
Sbjct: 144 PCHIELTLSEKEEPVKKEPETQLATSKSKKSQA 176
>gb|AEC10957.1| ribosomal petrp-like protein [Camellia sinensis]
Length = 186
Score = 210 bits (535), Expect(2) = 2e-53
Identities = 102/107 (95%), Positives = 103/107 (96%)
Frame = -1
Query: 700 MVKYSKEPENPTKSCKARGSDLRCHFKNTRETAHAIRKLPLIKAKRYLEDVLAHKQAIPF 521
MVKYSKEP+NPTKSCKARGSDLR HFKNTRETAHAIRKLPL KAKRYLEDVLAHKQAIPF
Sbjct: 1 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
Query: 520 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG 380
TRFCRGVGRTAQAKNRHSNGQGRWP KSA FILDLLKNAESNAEVKG
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPVKSAGFILDLLKNAESNAEVKG 107
Score = 25.8 bits (55), Expect(2) = 2e-53
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 273 PCHIELTLSXXXXXXXXXXETQLA-PRSKKNQA 178
PCHIEL LS E+QLA +S K+QA
Sbjct: 144 PCHIELILSEKEEPVKKEPESQLATSKSSKSQA 176
>emb|CBI15653.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 204 bits (518), Expect(2) = 2e-53
Identities = 98/107 (91%), Positives = 102/107 (95%)
Frame = -1
Query: 700 MVKYSKEPENPTKSCKARGSDLRCHFKNTRETAHAIRKLPLIKAKRYLEDVLAHKQAIPF 521
MVKYS+EP+NPTKSCKARGSDLR HFKNTRETAHAIRKL L KAKRYLEDVLAHKQAIPF
Sbjct: 27 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLRLTKAKRYLEDVLAHKQAIPF 86
Query: 520 TRFCRGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKG 380
RFCRGVGRTAQAKNRHSNGQGRWP KSAKFILDLLKNAESNA++KG
Sbjct: 87 QRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKG 133
Score = 32.0 bits (71), Expect(2) = 2e-53
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 273 PCHIELTLSXXXXXXXXXXETQLAPR-SKKNQA 178
PCHIEL LS +TQLAPR +KK QA
Sbjct: 170 PCHIELILSEKEEPVQKEPDTQLAPRKTKKTQA 202