BLASTX nr result

ID: Atractylodes22_contig00003286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003286
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts...   199   4e-49
emb|CBI31526.3| unnamed protein product [Vitis vinifera]              199   4e-49
gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-framesh...   188   9e-46
ref|XP_003595517.1| Pentatricopeptide repeat-containing protein ...   187   2e-45
ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...   183   4e-44

>ref|XP_002275646.2| PREDICTED: regulator of nonsense transcripts 2-like [Vitis vinifera]
          Length = 1222

 Score =  199 bits (507), Expect = 4e-49
 Identities = 105/166 (63%), Positives = 116/166 (69%)
 Frame = +2

Query: 2    ESLDSRKLELRARPTLNMMIPMNVFEGSTRDHHGRVSEGESGDEAIDYESGGRKEVQVKV 181
            ESLDSRKLELRARPTLNMMIPMNVFEGST+DHHGR  EGESGDE +D E+GG KEV+VKV
Sbjct: 1058 ESLDSRKLELRARPTLNMMIPMNVFEGSTKDHHGRGVEGESGDEILDEEAGGSKEVRVKV 1117

Query: 182  LVKRGSKQQTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNL 361
            LVKRG+KQQTKQM IP DCSLVQST            DIKRL+LEYNDREEEELN +G  
Sbjct: 1118 LVKRGNKQQTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQ 1177

Query: 362  PVGWSQSGGGRVVYXXXXXXXXXXXXXXXXXXXXXTGGGYYYSRRK 499
             + W+ SGG R V                      +GGG+YY RRK
Sbjct: 1178 TMSWTPSGGSR-VSRGSSWEGGRTSGARHRHHQNYSGGGFYYGRRK 1222


>emb|CBI31526.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score =  199 bits (507), Expect = 4e-49
 Identities = 105/166 (63%), Positives = 116/166 (69%)
 Frame = +2

Query: 2    ESLDSRKLELRARPTLNMMIPMNVFEGSTRDHHGRVSEGESGDEAIDYESGGRKEVQVKV 181
            ESLDSRKLELRARPTLNMMIPMNVFEGST+DHHGR  EGESGDE +D E+GG KEV+VKV
Sbjct: 1029 ESLDSRKLELRARPTLNMMIPMNVFEGSTKDHHGRGVEGESGDEILDEEAGGSKEVRVKV 1088

Query: 182  LVKRGSKQQTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNL 361
            LVKRG+KQQTKQM IP DCSLVQST            DIKRL+LEYNDREEEELN +G  
Sbjct: 1089 LVKRGNKQQTKQMFIPRDCSLVQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGVGTQ 1148

Query: 362  PVGWSQSGGGRVVYXXXXXXXXXXXXXXXXXXXXXTGGGYYYSRRK 499
             + W+ SGG R V                      +GGG+YY RRK
Sbjct: 1149 TMSWTPSGGSR-VSRGSSWEGGRTSGARHRHHQNYSGGGFYYGRRK 1193


>gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
            [Medicago truncatula]
          Length = 1212

 Score =  188 bits (478), Expect = 9e-46
 Identities = 102/168 (60%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
 Frame = +2

Query: 2    ESLDSRKLELRARPTLNMMIPMNVFEGSTRDHHGRVSEGESGDEAIDYESGGRKEVQVKV 181
            ES++ R+LELR RPTLNMMIPMNVFEGS +DHHGR + GESGDEA+D ++G  KEVQVKV
Sbjct: 1045 ESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDEDTGVSKEVQVKV 1104

Query: 182  LVKRGSKQQTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNL 361
            LVKRG+KQQTKQM IPSD SLVQST            DIKRL+LEYNDREEEELN LG  
Sbjct: 1105 LVKRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQ 1164

Query: 362  PVGWSQSGGGRVVYXXXXXXXXXXXXXXXXXXXXX--TGGGYYYSRRK 499
            P  W QSGG RV                         TGGG YYSRR+
Sbjct: 1165 PSNWMQSGGNRVGGRGNSFEGTSGRGGGSRHRHHHYYTGGGIYYSRRR 1212


>ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484565|gb|AES65768.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1705

 Score =  187 bits (476), Expect = 2e-45
 Identities = 102/167 (61%), Positives = 112/167 (67%), Gaps = 2/167 (1%)
 Frame = +2

Query: 2    ESLDSRKLELRARPTLNMMIPMNVFEGSTRDHHGRVSEGESGDEAIDYESGGRKEVQVKV 181
            ES++ R+LELR RPTLNMMIPMNVFEGS +DHHGR + GESGDEA+D ++G  KEVQVKV
Sbjct: 1065 ESMEQRRLELRGRPTLNMMIPMNVFEGSAKDHHGRGTGGESGDEALDEDTGVSKEVQVKV 1124

Query: 182  LVKRGSKQQTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNL 361
            LVKRG+KQQTKQM IPSD SLVQST            DIKRL+LEYNDREEEELN LG  
Sbjct: 1125 LVKRGNKQQTKQMYIPSDSSLVQSTKQKEAAELQEKEDIKRLILEYNDREEEELNGLGAQ 1184

Query: 362  PVGWSQSGGGRVVYXXXXXXXXXXXXXXXXXXXXX--TGGGYYYSRR 496
            P  W QSGG RV                         TGGG YYSRR
Sbjct: 1185 PSNWMQSGGNRVGGRGNSFEGTSGRGGGSRHRHHHYYTGGGIYYSRR 1231


>ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
            2-like, partial [Cucumis sativus]
          Length = 1144

 Score =  183 bits (464), Expect = 4e-44
 Identities = 89/132 (67%), Positives = 104/132 (78%)
 Frame = +2

Query: 2    ESLDSRKLELRARPTLNMMIPMNVFEGSTRDHHGRVSEGESGDEAIDYESGGRKEVQVKV 181
            ES+D R+ ELR RPTLNMMIPMN+FEGSTRDHHGR + GESGDE +D ++GG KEVQVKV
Sbjct: 978  ESMDQRRQELRGRPTLNMMIPMNLFEGSTRDHHGRGAGGESGDEGLDEDAGGSKEVQVKV 1037

Query: 182  LVKRGSKQQTKQMLIPSDCSLVQSTXXXXXXXXXXXXDIKRLVLEYNDREEEELNALGNL 361
            LVKRG+KQQTK+M IP DC+L+QST            DIKRL+LEYNDREEEELN LG+ 
Sbjct: 1038 LVKRGNKQQTKKMYIPRDCTLLQSTKQKEAAELEEKQDIKRLILEYNDREEEELNGLGSQ 1097

Query: 362  PVGWSQSGGGRV 397
             + W Q+GG RV
Sbjct: 1098 TMNWMQTGGNRV 1109


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