BLASTX nr result

ID: Atractylodes22_contig00003248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003248
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36857.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002268579.1| PREDICTED: uncharacterized protein LOC100267...    79   3e-13
ref|XP_002512438.1| DNA binding protein, putative [Ricinus commu...    64   1e-08
ref|XP_002523069.1| DNA binding protein, putative [Ricinus commu...    63   3e-08
ref|XP_002319512.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>emb|CBI36857.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -3

Query: 231 DWMPDEGPHDLSYSARPFGFPWCPFSGFT-IHSSMEEAEPSLNTFTNFHGNHAMINENTA 55
           DW PDE  +D +YS  PF   WCPFSGFT + SS EE E    T  +  G+HA+++E+ A
Sbjct: 91  DWTPDEETYDFNYSEMPFRVQWCPFSGFTQVRSSFEEVESPSTTHHDLQGHHAILSEHAA 150

Query: 54  APSSALSYNSYFRP 13
           A S+A SY +YF P
Sbjct: 151 ASSAAHSYVAYFGP 164


>ref|XP_002268579.1| PREDICTED: uncharacterized protein LOC100267498 [Vitis vinifera]
          Length = 407

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -3

Query: 231 DWMPDEGPHDLSYSARPFGFPWCPFSGFT-IHSSMEEAEPSLNTFTNFHGNHAMINENTA 55
           DW PDE  +D +YS  PF   WCPFSGFT + SS EE E    T  +  G+HA+++E+ A
Sbjct: 101 DWTPDEETYDFNYSEMPFRVQWCPFSGFTQVRSSFEEVESPSTTHHDLQGHHAILSEHAA 160

Query: 54  APSSALSYNSYFRP 13
           A S+A SY +YF P
Sbjct: 161 ASSAAHSYVAYFGP 174


>ref|XP_002512438.1| DNA binding protein, putative [Ricinus communis]
           gi|223548399|gb|EEF49890.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 430

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
 Frame = -3

Query: 231 DWMPDEGPHDLSYSARPFGFPWCPFSGFT-IHSSMEEAEPSLNTFTNFHGNHAMINENTA 55
           DW  DE  +DLSYS   FG  WCPF     + SS EE E S N + +  G+HA+  E+TA
Sbjct: 101 DWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSSFEEGEFSSNAYHDLLGHHAIFAEHTA 160

Query: 54  APSSA---LSYNSYFRP 13
           A SSA     Y +YF P
Sbjct: 161 AVSSATHPCPYIAYFGP 177


>ref|XP_002523069.1| DNA binding protein, putative [Ricinus communis]
           gi|223537631|gb|EEF39254.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 430

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = -3

Query: 231 DWMPDEGPHDLSYSARPFGFPWCPFSGFT-IHSSMEEAEPSLNTFTNFHGNHAMINENTA 55
           DW+P+E  +DLSYS  P+   WCPF     + SS  E E    T+ +  G+H++  E+TA
Sbjct: 120 DWIPEEDFYDLSYSEMPYRVHWCPFGELARVGSSFGEVESPSTTYHDLRGHHSVYAEHTA 179

Query: 54  APSSALSYNSYFRP 13
           A S A SY +Y  P
Sbjct: 180 ASSVAHSYVAYVGP 193


>ref|XP_002319512.1| predicted protein [Populus trichocarpa] gi|222857888|gb|EEE95435.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
 Frame = -3

Query: 231 DWMPDEGPHDLSYSARPFGFPWCPFSGFT-IHSSMEEAEPSLNTFTNFHGNHAMINENTA 55
           DW  DE  +DLSYS   FG  WCPF     + SS EE E S N + +  G H +  E+TA
Sbjct: 91  DWAHDEDLYDLSYSEMSFGVHWCPFGSLARLPSSFEEGEFSSNAYHDLLGQHPIFGEHTA 150

Query: 54  APSSA---LSYNSYFRP 13
           A SSA     Y +YF P
Sbjct: 151 AVSSATHPCPYIAYFGP 167


Top