BLASTX nr result

ID: Atractylodes22_contig00003243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003243
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277330.1| PREDICTED: PP2A regulatory subunit TAP46 [Vi...    79   4e-13
ref|XP_004148676.1| PREDICTED: PP2A regulatory subunit TAP46-lik...    74   1e-11
ref|XP_003602263.1| PP2A regulatory subunit TAP46 [Medicago trun...    74   2e-11
ref|XP_003590295.1| Cleavage and polyadenylation specificity fac...    74   2e-11
ref|XP_003526719.1| PREDICTED: PP2A regulatory subunit TAP46-lik...    72   4e-11

>ref|XP_002277330.1| PREDICTED: PP2A regulatory subunit TAP46 [Vitis vinifera]
           gi|302143911|emb|CBI23016.3| unnamed protein product
           [Vitis vinifera]
          Length = 403

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   LPTMSIEEAGLKEMEMMNKWQERTAKMIEEANSSWHNEKWKP 128
           LPTMSIEEAGL+EMEMMNKWQER AK+IEEANSSWH E  KP
Sbjct: 322 LPTMSIEEAGLREMEMMNKWQERNAKLIEEANSSWHKESRKP 363


>ref|XP_004148676.1| PREDICTED: PP2A regulatory subunit TAP46-like [Cucumis sativus]
           gi|449517531|ref|XP_004165799.1| PREDICTED: PP2A
           regulatory subunit TAP46-like [Cucumis sativus]
          Length = 398

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   LPTMSIEEAGLKEMEMMNKWQERTAKMIEEANSSWHNE 116
           LPTMSIEEAGL+EMEMMNKWQERTAK IEEANS+WH +
Sbjct: 315 LPTMSIEEAGLREMEMMNKWQERTAKYIEEANSAWHKD 352


>ref|XP_003602263.1| PP2A regulatory subunit TAP46 [Medicago truncatula]
           gi|355491311|gb|AES72514.1| PP2A regulatory subunit
           TAP46 [Medicago truncatula] gi|388516705|gb|AFK46414.1|
           unknown [Medicago truncatula]
          Length = 404

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/43 (79%), Positives = 39/43 (90%), Gaps = 1/43 (2%)
 Frame = +3

Query: 3   LPTMSIEEAGLKEMEMMNKWQERTAKMIEEANSSWHNE-KWKP 128
           +PTMSIEEAGLKEME+MN WQE TA+ IEEANSSWHN+ K+KP
Sbjct: 323 MPTMSIEEAGLKEMEIMNTWQENTARFIEEANSSWHNDRKFKP 365


>ref|XP_003590295.1| Cleavage and polyadenylation specificity factor subunit [Medicago
           truncatula] gi|355479343|gb|AES60546.1| Cleavage and
           polyadenylation specificity factor subunit [Medicago
           truncatula]
          Length = 630

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/43 (79%), Positives = 39/43 (90%), Gaps = 1/43 (2%)
 Frame = +3

Query: 3   LPTMSIEEAGLKEMEMMNKWQERTAKMIEEANSSWHNE-KWKP 128
           +PTMSIEEAGLKEME+MN WQE TA+ IEEANSSWHN+ K+KP
Sbjct: 549 MPTMSIEEAGLKEMEIMNTWQENTARFIEEANSSWHNDRKFKP 591


>ref|XP_003526719.1| PREDICTED: PP2A regulatory subunit TAP46-like [Glycine max]
          Length = 397

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   LPTMSIEEAGLKEMEMMNKWQERTAKMIEEANSSWHNEK 119
           +PTMSIEEAGLKEME+MNKWQER  +++EEANSSWHN++
Sbjct: 318 MPTMSIEEAGLKEMEIMNKWQERNVRLMEEANSSWHNDR 356


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