BLASTX nr result

ID: Atractylodes22_contig00003215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003215
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   167   8e-40
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   167   8e-40
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   167   1e-39
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   167   1e-39
emb|CBI38093.3| unnamed protein product [Vitis vinifera]              167   1e-39

>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  167 bits (423), Expect = 8e-40
 Identities = 97/168 (57%), Positives = 111/168 (66%), Gaps = 8/168 (4%)
 Frame = -3

Query: 480 VAVVNTRFPEVGDXXXXXXXLQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXX 301
           VAVVNT+FPEVGD       LQ +RAYK+NDKP+LLAAVKFIAHL+NQQ  H        
Sbjct: 374 VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELL 433

Query: 300 XXXXXXXXXDSVEVAAGFLTECGSILEDLCPEGLHGIFERLR----EGEVVKRV----EG 145
                    DSVEVA GF+TECGSIL+DL P+GLHGIFER R    EGE+ KRV    EG
Sbjct: 434 TVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 493

Query: 144 LFALRNANFQGHPAVRPXXXXXXXXXXXXXLTHEASLLDKIDPEIGLD 1
           LFA+R A FQG+PAVRP             +THE SL ++IDPEI LD
Sbjct: 494 LFAIRKAKFQGYPAVRP---ELDLVEQEDQITHEVSLDEEIDPEISLD 538


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  167 bits (423), Expect = 8e-40
 Identities = 97/168 (57%), Positives = 111/168 (66%), Gaps = 8/168 (4%)
 Frame = -3

Query: 480 VAVVNTRFPEVGDXXXXXXXLQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXX 301
           VAVVNT+FPEVGD       LQ +RAYK+NDKP+LLAAVKFIAHL+NQQ  H        
Sbjct: 390 VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELL 449

Query: 300 XXXXXXXXXDSVEVAAGFLTECGSILEDLCPEGLHGIFERLR----EGEVVKRV----EG 145
                    DSVEVA GF+TECGSIL+DL P+GLHGIFER R    EGE+ KRV    EG
Sbjct: 450 TVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 509

Query: 144 LFALRNANFQGHPAVRPXXXXXXXXXXXXXLTHEASLLDKIDPEIGLD 1
           LFA+R A FQG+PAVRP             +THE SL ++IDPEI LD
Sbjct: 510 LFAIRKAKFQGYPAVRP---ELDLVEQEDQITHEVSLDEEIDPEISLD 554


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  167 bits (422), Expect = 1e-39
 Identities = 98/168 (58%), Positives = 112/168 (66%), Gaps = 8/168 (4%)
 Frame = -3

Query: 480 VAVVNTRFPEVGDXXXXXXXLQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXX 301
           VAVVNT+FPEVGD       LQ +RAYK+NDKP+LLAAVKFIAHL+NQQV H        
Sbjct: 311 VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELL 370

Query: 300 XXXXXXXXXDSVEVAAGFLTECGSILEDLCPEGLHGIFERLR----EGEVVKRV----EG 145
                    DSVEVA GF+TECGSIL+DL P+GLHGIFER R    EGE+ KRV    EG
Sbjct: 371 TVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 430

Query: 144 LFALRNANFQGHPAVRPXXXXXXXXXXXXXLTHEASLLDKIDPEIGLD 1
           LFA+R A F+G+PAVRP             LTHE SL ++IDPEI LD
Sbjct: 431 LFAIRKAKFEGYPAVRP---ELDLVEQEDQLTHEISLQEEIDPEITLD 475


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  167 bits (422), Expect = 1e-39
 Identities = 98/168 (58%), Positives = 112/168 (66%), Gaps = 8/168 (4%)
 Frame = -3

Query: 480 VAVVNTRFPEVGDXXXXXXXLQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXX 301
           VAVVNT+FPEVGD       LQ +RAYK+NDKP+LLAAVKFIAHL+NQQV H        
Sbjct: 311 VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELL 370

Query: 300 XXXXXXXXXDSVEVAAGFLTECGSILEDLCPEGLHGIFERLR----EGEVVKRV----EG 145
                    DSVEVA GF+TECGSIL+DL P+GLHGIFER R    EGE+ KRV    EG
Sbjct: 371 TVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 430

Query: 144 LFALRNANFQGHPAVRPXXXXXXXXXXXXXLTHEASLLDKIDPEIGLD 1
           LFA+R A F+G+PAVRP             LTHE SL ++IDPEI LD
Sbjct: 431 LFAIRKAKFEGYPAVRP---ELDLVEQEDQLTHEISLQEEIDPEITLD 475


>emb|CBI38093.3| unnamed protein product [Vitis vinifera]
          Length = 2607

 Score =  167 bits (422), Expect = 1e-39
 Identities = 99/168 (58%), Positives = 111/168 (66%), Gaps = 8/168 (4%)
 Frame = -3

Query: 480 VAVVNTRFPEVGDXXXXXXXLQFQRAYKQNDKPRLLAAVKFIAHLLNQQVVHXXXXXXXX 301
           VAVVNT+FPEVG+       LQF+RAYK+NDK +LLAAVKFIAHL+NQQV H        
Sbjct: 18  VAVVNTKFPEVGELLMRRIVLQFKRAYKRNDKHQLLAAVKFIAHLVNQQVAHEIIALELL 77

Query: 300 XXXXXXXXXDSVEVAAGFLTECGSILEDLCPEGLHGIFERLR----EGEVVKRV----EG 145
                    DSVEVA GF+ ECGSIL+DL P+GLHGIFER R    EGE+ KRV    EG
Sbjct: 78  ALMLENPTDDSVEVAVGFVKECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 137

Query: 144 LFALRNANFQGHPAVRPXXXXXXXXXXXXXLTHEASLLDKIDPEIGLD 1
           LFA+R A FQGHPAVRP             LTHE SL +KIDPEI LD
Sbjct: 138 LFAIRKAKFQGHPAVRP---ELDLVEQEDQLTHEISLEEKIDPEITLD 182


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