BLASTX nr result

ID: Atractylodes22_contig00003205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003205
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis...   242   3e-96
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v...   239   1e-94
ref|XP_002336155.1| predicted protein [Populus trichocarpa] gi|2...   234   9e-93
ref|XP_002326163.1| predicted protein [Populus trichocarpa] gi|1...   234   9e-93
ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu...   232   3e-92

>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
          Length = 405

 Score =  242 bits (617), Expect(3) = 3e-96
 Identities = 120/129 (93%), Positives = 127/129 (98%)
 Frame = -1

Query: 430 EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKTSE 251
           EGAKLVKAFRNIPGVE+ANVERLNLLKLAPGGHLGRFIIWTKSA EK+DSIYGSFDKTSE
Sbjct: 218 EGAKLVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSE 277

Query: 250 KKKGYVLPRAKMENADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 71
           KKKGY+LPRAKM NADLARIINSDEVQSVV+PIKKEVKRAPMKKNPLKNLNTML+LNPYA
Sbjct: 278 KKKGYLLPRAKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYA 337

Query: 70  KTAKRMAVL 44
           KTA+RMA+L
Sbjct: 338 KTARRMALL 346



 Score =  100 bits (249), Expect(3) = 3e-96
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -2

Query: 642 AIKVLKQIGAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 487
           AI +LKQ+GAYPDAEKAKDS GIRPGKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 171 AIDILKQVGAYPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 222



 Score = 58.2 bits (139), Expect(3) = 3e-96
 Identities = 29/41 (70%), Positives = 29/41 (70%)
 Frame = -3

Query: 869 WHRKINVNQKRYXXXXXXXXXXXXSLVMARGHRIESVPELP 747
           WHRKINVNQKRY            SLVMARGHRIESVPELP
Sbjct: 115 WHRKINVNQKRYAVVSAIAASAVPSLVMARGHRIESVPELP 155


>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
          Length = 406

 Score =  239 bits (610), Expect(3) = 1e-94
 Identities = 117/129 (90%), Positives = 127/129 (98%)
 Frame = -1

Query: 430 EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKTSE 251
           EGAKLVKAFRNIPGVE+ANV+RLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+KTSE
Sbjct: 219 EGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSE 278

Query: 250 KKKGYVLPRAKMENADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 71
           KK GY+LPR+KM NADLARIINSDEVQSVV+PIKKEVKRAPMKKNPLKNLNTML+LNPYA
Sbjct: 279 KKNGYLLPRSKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYA 338

Query: 70  KTAKRMAVL 44
           KTA+RMA+L
Sbjct: 339 KTARRMALL 347



 Score = 98.2 bits (243), Expect(3) = 1e-94
 Identities = 47/52 (90%), Positives = 49/52 (94%)
 Frame = -2

Query: 642 AIKVLKQIGAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 487
           AI +LKQ+GAYPDAEKAKDS  IRPGKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 172 AIDILKQVGAYPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 223



 Score = 58.2 bits (139), Expect(3) = 1e-94
 Identities = 29/41 (70%), Positives = 29/41 (70%)
 Frame = -3

Query: 869 WHRKINVNQKRYXXXXXXXXXXXXSLVMARGHRIESVPELP 747
           WHRKINVNQKRY            SLVMARGHRIESVPELP
Sbjct: 116 WHRKINVNQKRYAVVSAIAASAIPSLVMARGHRIESVPELP 156


>ref|XP_002336155.1| predicted protein [Populus trichocarpa] gi|222874555|gb|EEF11686.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  234 bits (598), Expect(3) = 9e-93
 Identities = 115/129 (89%), Positives = 124/129 (96%)
 Frame = -1

Query: 430 EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKTSE 251
           EGAKLVKAFRNIPGVE+ANVERLNLL+LAPGGHLGRF+IWTKSA EKLDSIYG+FDK+SE
Sbjct: 221 EGAKLVKAFRNIPGVEVANVERLNLLRLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKSSE 280

Query: 250 KKKGYVLPRAKMENADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 71
           KKKGYVLPR KM NADLARIINSDEVQSVV PIKKEVKRAP+KKNPLKNLN ML+LNPYA
Sbjct: 281 KKKGYVLPRTKMVNADLARIINSDEVQSVVNPIKKEVKRAPLKKNPLKNLNVMLKLNPYA 340

Query: 70  KTAKRMAVL 44
           KTA+RMA+L
Sbjct: 341 KTARRMALL 349



 Score = 97.4 bits (241), Expect(3) = 9e-93
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -2

Query: 642 AIKVLKQIGAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 487
           AIKVLK+IGAYPDAEKAKDS  IR GKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 174 AIKVLKEIGAYPDAEKAKDSQAIRAGKGKMRNRRYISRKGPLIVYGTEGAKL 225



 Score = 57.0 bits (136), Expect(3) = 9e-93
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 869 WHRKINVNQKRYXXXXXXXXXXXXSLVMARGHRIESVPELP 747
           WHRKINVNQKRY            SLVMARGHR+ESVPE+P
Sbjct: 118 WHRKINVNQKRYAVVSAIAASAIPSLVMARGHRVESVPEMP 158


>ref|XP_002326163.1| predicted protein [Populus trichocarpa] gi|118486971|gb|ABK95318.1|
           unknown [Populus trichocarpa]
           gi|222833356|gb|EEE71833.1| predicted protein [Populus
           trichocarpa]
          Length = 408

 Score =  234 bits (598), Expect(3) = 9e-93
 Identities = 115/129 (89%), Positives = 124/129 (96%)
 Frame = -1

Query: 430 EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKTSE 251
           EGAKLVKAFRNIPGVE+ANVERLNLL+LAPGGHLGRF+IWTKSA EKLDSIYG+FDK+SE
Sbjct: 221 EGAKLVKAFRNIPGVEVANVERLNLLRLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKSSE 280

Query: 250 KKKGYVLPRAKMENADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 71
           KKKGYVLPR KM NADLARIINSDEVQSVV PIKKEVKRAP+KKNPLKNLN ML+LNPYA
Sbjct: 281 KKKGYVLPRTKMVNADLARIINSDEVQSVVNPIKKEVKRAPLKKNPLKNLNVMLKLNPYA 340

Query: 70  KTAKRMAVL 44
           KTA+RMA+L
Sbjct: 341 KTARRMALL 349



 Score = 97.4 bits (241), Expect(3) = 9e-93
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -2

Query: 642 AIKVLKQIGAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 487
           AIKVLK+IGAYPDAEKAKDS  IR GKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 174 AIKVLKEIGAYPDAEKAKDSQAIRAGKGKMRNRRYISRKGPLIVYGTEGAKL 225



 Score = 57.0 bits (136), Expect(3) = 9e-93
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 869 WHRKINVNQKRYXXXXXXXXXXXXSLVMARGHRIESVPELP 747
           WHRKINVNQKRY            SLVMARGHR+ESVPE+P
Sbjct: 118 WHRKINVNQKRYAVVSAIAASAIPSLVMARGHRVESVPEMP 158


>ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus]
           gi|449520008|ref|XP_004167026.1| PREDICTED: 60S
           ribosomal protein L4-like [Cucumis sativus]
          Length = 405

 Score =  232 bits (592), Expect(3) = 3e-92
 Identities = 115/129 (89%), Positives = 124/129 (96%)
 Frame = -1

Query: 430 EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKTSE 251
           EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K+SE
Sbjct: 218 EGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSE 277

Query: 250 KKKGYVLPRAKMENADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 71
           KKKGYVLPR+KM NADL+RIINSDEVQSVVKPIKK VKR  +KKNPLKNLN ML+LNPYA
Sbjct: 278 KKKGYVLPRSKMVNADLSRIINSDEVQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYA 337

Query: 70  KTAKRMAVL 44
           KTA+RMA+L
Sbjct: 338 KTARRMALL 346



 Score = 99.4 bits (246), Expect(3) = 3e-92
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -2

Query: 642 AIKVLKQIGAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 487
           AIKVLKQ+GA+PDAEKAKDS  IRPGKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 171 AIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKL 222



 Score = 55.8 bits (133), Expect(3) = 3e-92
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = -3

Query: 869 WHRKINVNQKRYXXXXXXXXXXXXSLVMARGHRIESVPELP 747
           WHRKINVNQKRY            SLV+ARGHRIE+VPELP
Sbjct: 115 WHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIETVPELP 155


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