BLASTX nr result
ID: Atractylodes22_contig00003204
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00003204
(1142 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis... 338 1e-90
ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v... 335 1e-89
gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides] 330 1e-88
ref|XP_002336155.1| predicted protein [Populus trichocarpa] gi|2... 329 3e-88
ref|XP_002322848.1| predicted protein [Populus trichocarpa] gi|2... 329 3e-88
>ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera]
Length = 405
Score = 338 bits (868), Expect = 1e-90
Identities = 185/273 (67%), Positives = 194/273 (71%)
Frame = -2
Query: 1141 GAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLXXXXXXXXXXXXXXXX 962
GAYPDAEKAKDS GIRPGKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 179 GAYPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKL---------------- 222
Query: 961 EGAKLVKSFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFEKTSE 782
VK+FRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSA EK+DSIYGSF+KTSE
Sbjct: 223 -----VKAFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSE 277
Query: 781 KKKGYVLPRAKMANADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 602
KKKGY+LPRAKM NADLARIINSDEVQSVV+PIKKEVKRAPMKKNPLKNLNTML+LNPYA
Sbjct: 278 KKKGYLLPRAKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYA 337
Query: 601 KTAKRMXXXXXXXXXXXXXXXXXXXXQPISKXXXXXXXXXXXXXXXXXXXXXXKRQPISK 422
KTA+RM KR I K
Sbjct: 338 KTARRM-----------------------------ALLAEAQRVKAKKEKLDKKRAQIPK 368
Query: 421 EEAAKIKTASKAWYKTMISDSDYAEFDVFTKWL 323
EEAA IK A KAWY+TMISDSDY EFD F+KWL
Sbjct: 369 EEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWL 401
>ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
Length = 406
Score = 335 bits (860), Expect = 1e-89
Identities = 182/273 (66%), Positives = 193/273 (70%)
Frame = -2
Query: 1141 GAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLXXXXXXXXXXXXXXXX 962
GAYPDAEKAKDS IRPGKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 180 GAYPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKL---------------- 223
Query: 961 EGAKLVKSFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFEKTSE 782
VK+FRNIPGVEVANV+RLNLLKLAPGGHLGRF+IWTKSAFEKLDSIYGSFEKTSE
Sbjct: 224 -----VKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSE 278
Query: 781 KKKGYVLPRAKMANADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 602
KK GY+LPR+KM NADLARIINSDEVQSVV+PIKKEVKRAPMKKNPLKNLNTML+LNPYA
Sbjct: 279 KKNGYLLPRSKMVNADLARIINSDEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYA 338
Query: 601 KTAKRMXXXXXXXXXXXXXXXXXXXXQPISKXXXXXXXXXXXXXXXXXXXXXXKRQPISK 422
KTA+RM KR+ I K
Sbjct: 339 KTARRM-----------------------------ALLAEAQRVKAKQEKLDKKRKQIPK 369
Query: 421 EEAAKIKTASKAWYKTMISDSDYAEFDVFTKWL 323
EE A IK A KAWY+TMISDSDY EFD F+KWL
Sbjct: 370 EEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWL 402
>gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 407
Score = 330 bits (847), Expect(2) = 1e-88
Identities = 179/273 (65%), Positives = 191/273 (69%)
Frame = -2
Query: 1141 GAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLXXXXXXXXXXXXXXXX 962
GA+PDAEKAKDS IRPGKGKMRNRRYISRKGPLIVYGTEGAK+
Sbjct: 181 GAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKM---------------- 224
Query: 961 EGAKLVKSFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFEKTSE 782
VK+FRNIPGVEVANVERLNLLKLAPGGHLGRF+IWTKSA EKLDSIYGSFEK SE
Sbjct: 225 -----VKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAIEKLDSIYGSFEKCSE 279
Query: 781 KKKGYVLPRAKMANADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 602
KKKGYVLPR+KM NADLARIINSDEVQSVVKPIKKEVKRA +KKNPLKNLN +L+LNPYA
Sbjct: 280 KKKGYVLPRSKMVNADLARIINSDEVQSVVKPIKKEVKRATLKKNPLKNLNVLLKLNPYA 339
Query: 601 KTAKRMXXXXXXXXXXXXXXXXXXXXQPISKXXXXXXXXXXXXXXXXXXXXXXKRQPISK 422
KTA+RM KR+P+SK
Sbjct: 340 KTARRM-----------------------------ALLAEAERVKSKKEKLDKKRKPVSK 370
Query: 421 EEAAKIKTASKAWYKTMISDSDYAEFDVFTKWL 323
EE A K A KAWYKTMISDSDY EF+ FTKWL
Sbjct: 371 EELAAAKAAGKAWYKTMISDSDYTEFENFTKWL 403
Score = 23.9 bits (50), Expect(2) = 1e-88
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 260 FTKWLGVSQ 234
FTKWLGVSQ
Sbjct: 399 FTKWLGVSQ 407
>ref|XP_002336155.1| predicted protein [Populus trichocarpa] gi|222874555|gb|EEF11686.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 329 bits (844), Expect(2) = 3e-88
Identities = 178/273 (65%), Positives = 190/273 (69%)
Frame = -2
Query: 1141 GAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLXXXXXXXXXXXXXXXX 962
GAYPDAEKAKDS IR GKGKMRNRRYISRKGPLIVYGTEGAKL
Sbjct: 182 GAYPDAEKAKDSQAIRAGKGKMRNRRYISRKGPLIVYGTEGAKL---------------- 225
Query: 961 EGAKLVKSFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFEKTSE 782
VK+FRNIPGVEVANVERLNLL+LAPGGHLGRF+IWTKSA EKLDSIYG+F+K+SE
Sbjct: 226 -----VKAFRNIPGVEVANVERLNLLRLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKSSE 280
Query: 781 KKKGYVLPRAKMANADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 602
KKKGYVLPR KM NADLARIINSDEVQSVV PIKKEVKRAP+KKNPLKNLN ML+LNPYA
Sbjct: 281 KKKGYVLPRTKMVNADLARIINSDEVQSVVNPIKKEVKRAPLKKNPLKNLNVMLKLNPYA 340
Query: 601 KTAKRMXXXXXXXXXXXXXXXXXXXXQPISKXXXXXXXXXXXXXXXXXXXXXXKRQPISK 422
KTA+RM KR+P+SK
Sbjct: 341 KTARRM-----------------------------ALLAEAERVKSKKEKLDRKRKPVSK 371
Query: 421 EEAAKIKTASKAWYKTMISDSDYAEFDVFTKWL 323
EE A K A KAWYKTMISDSDY EF+ FTKWL
Sbjct: 372 EELAAAKAAGKAWYKTMISDSDYTEFENFTKWL 404
Score = 23.9 bits (50), Expect(2) = 3e-88
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 260 FTKWLGVSQ 234
FTKWLGVSQ
Sbjct: 400 FTKWLGVSQ 408
>ref|XP_002322848.1| predicted protein [Populus trichocarpa] gi|222867478|gb|EEF04609.1|
predicted protein [Populus trichocarpa]
Length = 407
Score = 329 bits (844), Expect(2) = 3e-88
Identities = 178/273 (65%), Positives = 191/273 (69%)
Frame = -2
Query: 1141 GAYPDAEKAKDSVGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLXXXXXXXXXXXXXXXX 962
GA+PDAEKAKDS IRPGKGKMRNRRYISRKGPLIVYGTEGAK+
Sbjct: 181 GAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKM---------------- 224
Query: 961 EGAKLVKSFRNIPGVEVANVERLNLLKLAPGGHLGRFIIWTKSAFEKLDSIYGSFEKTSE 782
VK+FRNIPGVEVANVERLNLLKLAPGGHLGRF+IWTKSA EKLDSIYGSFEK SE
Sbjct: 225 -----VKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVIWTKSAIEKLDSIYGSFEKCSE 279
Query: 781 KKKGYVLPRAKMANADLARIINSDEVQSVVKPIKKEVKRAPMKKNPLKNLNTMLRLNPYA 602
KKKGYVLPR+KM NADLARIINSDEVQSVVKPIK+EVKRA +KKNPLKNLN +L+LNPYA
Sbjct: 280 KKKGYVLPRSKMVNADLARIINSDEVQSVVKPIKREVKRATLKKNPLKNLNVLLKLNPYA 339
Query: 601 KTAKRMXXXXXXXXXXXXXXXXXXXXQPISKXXXXXXXXXXXXXXXXXXXXXXKRQPISK 422
KTA+RM KR+P+SK
Sbjct: 340 KTARRM-----------------------------ALLAEAERVKSKKEKLDRKRKPVSK 370
Query: 421 EEAAKIKTASKAWYKTMISDSDYAEFDVFTKWL 323
EE A K A KAWYKTMISDSDY EF+ FTKWL
Sbjct: 371 EELAAAKAAGKAWYKTMISDSDYTEFENFTKWL 403
Score = 23.9 bits (50), Expect(2) = 3e-88
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 260 FTKWLGVSQ 234
FTKWLGVSQ
Sbjct: 399 FTKWLGVSQ 407