BLASTX nr result

ID: Atractylodes22_contig00003174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003174
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...   177   6e-43
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   173   1e-41
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      172   3e-41
emb|CCH50976.1| T4.15 [Malus x robusta]                               171   4e-41
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...   171   4e-41

>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score =  177 bits (450), Expect = 6e-43
 Identities = 75/117 (64%), Positives = 98/117 (83%)
 Frame = +2

Query: 11  VPQCDSFKYLGSVIQNEGEVDNDVTHRIKAGWLKWRAATGVLCDRKVPLKLKGKFYRVAI 190
           +P+ +SFKYLG+VIQ  G++D+DVTHR+ A W+KWR A+GVLCD+K+PLKLKGKFYRV +
Sbjct: 31  IPKKESFKYLGAVIQGSGDIDDDVTHRVGAAWMKWRLASGVLCDKKIPLKLKGKFYRVVV 90

Query: 191 RPAMLYGSECWPLRKSHERKLEVAEMRMLRWMCGRTRLDRIPNEVFRGELRVACITD 361
           RPA+LYG+ECWP++ +H  K+ VAEMRMLRWMCG TR D+I NEV R ++ VA + D
Sbjct: 91  RPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVD 147


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score =  173 bits (439), Expect = 1e-41
 Identities = 75/120 (62%), Positives = 98/120 (81%)
 Frame = +2

Query: 2   GERVPQCDSFKYLGSVIQNEGEVDNDVTHRIKAGWLKWRAATGVLCDRKVPLKLKGKFYR 181
           G+ VPQ D+F+YLGS++Q +G++D DV HRIKAGW+KWR A+G+LCD++VP KLKGKFYR
Sbjct: 371 GQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYR 430

Query: 182 VAIRPAMLYGSECWPLRKSHERKLEVAEMRMLRWMCGRTRLDRIPNEVFRGELRVACITD 361
            AIRPA+LYG+ECWP ++ H ++L VAEMRMLRWMCG TR DR+ N+  R  + VA I +
Sbjct: 431 TAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPIAE 490


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  172 bits (435), Expect = 3e-41
 Identities = 75/117 (64%), Positives = 94/117 (80%)
 Frame = +2

Query: 11  VPQCDSFKYLGSVIQNEGEVDNDVTHRIKAGWLKWRAATGVLCDRKVPLKLKGKFYRVAI 190
           +PQ   FKYLGSVIQ++GE++ DV HRI+AGW+KWR A+GVLCD KVP+KLKGKFYR A+
Sbjct: 183 IPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYRTAV 242

Query: 191 RPAMLYGSECWPLRKSHERKLEVAEMRMLRWMCGRTRLDRIPNEVFRGELRVACITD 361
           RP +LYG+ECW ++  HE K+ VAEMRMLRWMCG+TR D+I NE  R  + VA I +
Sbjct: 243 RPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVE 299


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  171 bits (434), Expect = 4e-41
 Identities = 73/115 (63%), Positives = 95/115 (82%)
 Frame = +2

Query: 5    ERVPQCDSFKYLGSVIQNEGEVDNDVTHRIKAGWLKWRAATGVLCDRKVPLKLKGKFYRV 184
            + +P+ D F+YLGS++Q  GE+D D+ HRI+AGW+KW++A+GVLCDR++PLKLKGKFYR 
Sbjct: 789  QEIPKSDRFRYLGSILQKNGELDGDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRT 848

Query: 185  AIRPAMLYGSECWPLRKSHERKLEVAEMRMLRWMCGRTRLDRIPNEVFRGELRVA 349
            AIRPAMLYG+ECW ++  H  K+ VAEMRMLRWMCG TR D+I NE  RG++ VA
Sbjct: 849  AIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVA 903


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score =  171 bits (434), Expect = 4e-41
 Identities = 74/120 (61%), Positives = 97/120 (80%)
 Frame = +2

Query: 2   GERVPQCDSFKYLGSVIQNEGEVDNDVTHRIKAGWLKWRAATGVLCDRKVPLKLKGKFYR 181
           G+ VPQ D+F+YLGS++Q +G++D DV HRIKAGW+KWR A+G+LCD++VP KLKGKFYR
Sbjct: 111 GQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYR 170

Query: 182 VAIRPAMLYGSECWPLRKSHERKLEVAEMRMLRWMCGRTRLDRIPNEVFRGELRVACITD 361
            AIRPA+LYG+ECWP ++ H ++L VAEMRMLRWMCG TR D + N+  R  + VA I +
Sbjct: 171 TAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDHVRNDDIRDRVGVAPIAE 230


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