BLASTX nr result

ID: Atractylodes22_contig00003170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003170
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    60   1e-07
emb|CBI34757.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = +1

Query: 1    PEDLYSLLSKSIDSHEE--KVVVPVENGNHTINKDPAPLYPYHNFAADGS---PEIMKTV 165
            PED+Y LL      HE+  KV VP+     T       +Y   + A+ G     +I K+V
Sbjct: 1316 PEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSV 1375

Query: 166  LKKHISAEDIKRLSKDLKHILYKYDVNHKLSQDDK 270
            L+  +S  DI++LS+ LK IL KY +NH+LS+ DK
Sbjct: 1376 LRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDK 1410


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = +1

Query: 1    PEDLYSLLSKSIDSHEE--KVVVPVENGNHTINKDPAPLYPYHNFAADGS---PEIMKTV 165
            PED+Y LL      HE+  KV VP+     T       +Y   + A+ G     +I K+V
Sbjct: 1174 PEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSV 1233

Query: 166  LKKHISAEDIKRLSKDLKHILYKYDVNHKLSQDDK 270
            L+  +S  DI++LS+ LK IL KY +NH+LS+ DK
Sbjct: 1234 LRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDK 1268


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