BLASTX nr result

ID: Atractylodes22_contig00003161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003161
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a g...   240   1e-61
sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; ...   234   6e-60
ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, p...   233   2e-59
ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [C...   233   2e-59
gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum t...   232   4e-59

>sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a gi|469248|gb|AAA80978.1|
           ribosomal protein S3a [Helianthus annuus]
          Length = 260

 Score =  240 bits (613), Expect = 1e-61
 Identities = 117/129 (90%), Positives = 126/129 (97%)
 Frame = -1

Query: 567 SYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPE 388
           ++TLRMFCIGFTKKRANQVKRTCYAQSSQI+QIRRKMREIM+ QAQ+CDLKELVQKFIPE
Sbjct: 132 NFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPE 191

Query: 387 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIGVKMDRPADEPI 208
           SIGREIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSED+GVK+DRPA+E  
Sbjct: 192 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPAEEAA 251

Query: 207 PEATEVIGA 181
           PEATEVIGA
Sbjct: 252 PEATEVIGA 260


>sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
           protein
          Length = 261

 Score =  234 bits (598), Expect = 6e-60
 Identities = 118/130 (90%), Positives = 124/130 (95%), Gaps = 1/130 (0%)
 Frame = -1

Query: 567 SYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPE 388
           SYTLRMFCIGFTKKRANQ KRTCYAQSSQIRQIRRKMREIM+NQAQSCDLK+LVQKFIPE
Sbjct: 132 SYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPE 191

Query: 387 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DIGVKMDRPADEP 211
           SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E DIG K+DRPA+E 
Sbjct: 192 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDIGTKLDRPAEEA 251

Query: 210 IPEATEVIGA 181
           + E TEVIGA
Sbjct: 252 VAEPTEVIGA 261


>ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Cucumis
           sativus]
          Length = 208

 Score =  233 bits (594), Expect = 2e-59
 Identities = 113/129 (87%), Positives = 124/129 (96%)
 Frame = -1

Query: 567 SYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPE 388
           +YTLRMFCIGFTK+R NQVKRTCYAQSSQIRQIRRKMREIM+NQA SCDLKELV+KFIPE
Sbjct: 80  NYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE 139

Query: 387 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIGVKMDRPADEPI 208
           SIG++IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED+GVK+DRPA+E +
Sbjct: 140 SIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEAV 199

Query: 207 PEATEVIGA 181
             ATEV+GA
Sbjct: 200 EGATEVVGA 208


>ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
           gi|449472057|ref|XP_004153483.1| PREDICTED: 40S
           ribosomal protein S3a-like [Cucumis sativus]
          Length = 260

 Score =  233 bits (594), Expect = 2e-59
 Identities = 113/129 (87%), Positives = 124/129 (96%)
 Frame = -1

Query: 567 SYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPE 388
           +YTLRMFCIGFTK+R NQVKRTCYAQSSQIRQIRRKMREIM+NQA SCDLKELV+KFIPE
Sbjct: 132 NYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE 191

Query: 387 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIGVKMDRPADEPI 208
           SIG++IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED+GVK+DRPA+E +
Sbjct: 192 SIGKDIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPAEEAV 251

Query: 207 PEATEVIGA 181
             ATEV+GA
Sbjct: 252 EGATEVVGA 260


>gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum tuberosum]
          Length = 260

 Score =  232 bits (591), Expect = 4e-59
 Identities = 114/129 (88%), Positives = 122/129 (94%)
 Frame = -1

Query: 567 SYTLRMFCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPE 388
           SYTLRMFCIGFTKKR NQ KRTCYAQSSQIRQIRRKMREIM+NQAQSCDLK+LV KFIPE
Sbjct: 132 SYTLRMFCIGFTKKRPNQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVLKFIPE 191

Query: 387 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDIGVKMDRPADEPI 208
           SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLG+LMEVHGDYSED+GVK+DRPA++  
Sbjct: 192 SIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGRLMEVHGDYSEDVGVKVDRPAEDVA 251

Query: 207 PEATEVIGA 181
            E TEV+GA
Sbjct: 252 TEPTEVVGA 260


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