BLASTX nr result

ID: Atractylodes22_contig00003062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003062
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628780.1| F-box family protein [Medicago truncatula] g...    82   6e-14
ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...    81   1e-13
ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|3554...    74   1e-11
ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    73   3e-11
ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|3555...    73   3e-11

>ref|XP_003628780.1| F-box family protein [Medicago truncatula]
           gi|355522802|gb|AET03256.1| F-box family protein
           [Medicago truncatula]
          Length = 451

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/113 (38%), Positives = 64/113 (56%)
 Frame = +3

Query: 6   KYAIQTSKLSRKWKHIWTSMPYLNLNSQTFRTLPQFANFVKHVLSHRNNQTEVTAAVLIL 185
           K+A+QT+ LS +W ++W  +P L LNS  F+TL  F  FV  VLS R++ T +       
Sbjct: 100 KHAVQTTILSTRWNNLWKRLPTLRLNSSHFKTLKSFTKFVSRVLSLRDDSTALHTLYFQR 159

Query: 186 TGKATQFVVKSILNYAYSHNVRQLTMIWVTRKGIEFPQYLFSSQTLKHLTLAT 344
            G     ++  ++ YA SHNV++L  I+V   G+ FP Y F   TL  L L++
Sbjct: 160 KGCVEPPILSKLVEYAASHNVQRLD-IFVRCDGVYFPPYFFKCNTLTSLNLSS 211


>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/111 (40%), Positives = 63/111 (56%)
 Frame = +3

Query: 6   KYAIQTSKLSRKWKHIWTSMPYLNLNSQTFRTLPQFANFVKHVLSHRNNQTEVTAAVLIL 185
           K+A+QT  LS +WK++W  +P L L S  FR + +FA FV  VLS RN+ T +       
Sbjct: 37  KHAVQTCILSTRWKNLWKRLPSLALRSSDFRNVKRFAKFVSRVLSLRNDSTSLHTVDFCR 96

Query: 186 TGKATQFVVKSILNYAYSHNVRQLTMIWVTRKGIEFPQYLFSSQTLKHLTL 338
           T     +++K I+ YA SHNV+QL  + V      FP   FS +TL  L+L
Sbjct: 97  TAIVEPYLLKKIVKYAVSHNVQQLD-VSVAGNMEYFPPSFFSCRTLTSLSL 146


>ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|355487969|gb|AES69172.1|
           F-box family-1 [Medicago truncatula]
          Length = 384

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
 Frame = +3

Query: 3   MKYAIQTSKLSRKWKHIWTSMPYLNLNSQTFRTLPQFANFVKHVLSHRNNQTEVTAAVLI 182
           +K  +QTS LS++WK++W  +P L L S  F+TL  F  FV  +LS RN  T +     I
Sbjct: 34  VKQTVQTSILSKRWKNLWKHLPTLTLTSSHFKTLKAFTKFVTPLLSLRNVPTSLHTLKFI 93

Query: 183 LTGKATQFVVKSILNYAYSHNVRQLTMIWVTRKGI----EFPQYLFSSQTLKHL 332
             G     + + ILNYA SHNV +L +     KG     + P   FS  TL  L
Sbjct: 94  YNGTIDPRLFEKILNYAVSHNVNELQL-----KGTCDIQQLPSCFFSCNTLTSL 142


>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/112 (38%), Positives = 62/112 (55%)
 Frame = +3

Query: 6   KYAIQTSKLSRKWKHIWTSMPYLNLNSQTFRTLPQFANFVKHVLSHRNNQTEVTAAVLIL 185
           K A QT  LS++WK++W  +  L L+++ F T+  F  FV HVLSHR++ T + A     
Sbjct: 32  KEAAQTCILSKRWKNLWKFVTTLKLSTRHFETIHPFTKFVSHVLSHRDDSTALQALDSHR 91

Query: 186 TGKATQFVVKSILNYAYSHNVRQLTMIWVTRKGIEFPQYLFSSQTLKHLTLA 341
                 +++K I+ YA SH+V+QL  I V      FP   FS  TL  L L+
Sbjct: 92  ASIVEAYLLKKIVKYAVSHSVQQL-QISVDADFQCFPPCFFSCNTLTSLKLS 142


>ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|355518439|gb|AET00063.1|
           F-box family-9 [Medicago truncatula]
          Length = 402

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 8/127 (6%)
 Frame = +3

Query: 6   KYAIQTSKLSRKWKHIWTSMPYLNLNSQTFRTLPQFANFVKHVLSHRNNQTEVTAAVLIL 185
           K A+ TS LS +W+ +W  +P L L+S  FRT+P F  FV  VL+ R++    + A+  L
Sbjct: 46  KQAVTTSILSLRWRDLWKLLPALILDSSDFRTIPIFNKFVHRVLTLRDS----SLALNSL 101

Query: 186 TGKATQ-FVVKSILNYAYSHNVRQLTMIWVTRKGIEFPQYLFSSQTLKHL-------TLA 341
             +  Q  ++KS++NYA SHN+++L  ++V     + P  +FS QTL HL       TL 
Sbjct: 102 NFRHNQPRIIKSVVNYAISHNIQRL-RLYVGCHIAQIPPSVFSCQTLTHLELYFGEQTLF 160

Query: 342 TKEPNVP 362
            K  N+P
Sbjct: 161 PKSLNLP 167


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