BLASTX nr result

ID: Atractylodes22_contig00003061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003061
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...    54   8e-12
ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|3554...    53   5e-11
ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|3555...    43   7e-09
ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    47   3e-08
ref|XP_003597758.1| F-box/LRR-repeat protein [Medicago truncatul...    45   3e-08

>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score = 53.5 bits (127), Expect(2) = 8e-12
 Identities = 30/76 (39%), Positives = 43/76 (56%)
 Frame = +2

Query: 227 FANFVKHALSHRNNQTEVSVAELTLTGKGTQFVVKSIVNYAYSHNVRQLTMTWVTRNVVE 406
           FA FV   LS RN+ T +   +   T     +++K IV YA SHNV+QL ++ V  N+  
Sbjct: 72  FAKFVSRVLSLRNDSTSLHTVDFCRTAIVEPYLLKKIVKYAVSHNVQQLDVS-VAGNMEY 130

Query: 407 FPQNLFTSHTLKHLTL 454
           FP + F+  TL  L+L
Sbjct: 131 FPPSFFSCRTLTSLSL 146



 Score = 41.2 bits (95), Expect(2) = 8e-12
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +1

Query: 4   LDMKYATQTSKLSRKWKHIWTSMPYLNLNSQAFRTLPQFA 123
           L+ K+A QT  LS +WK++W  +P L L S  FR + +FA
Sbjct: 34  LNTKHAVQTCILSTRWKNLWKRLPSLALRSSDFRNVKRFA 73


>ref|XP_003598915.1| F-box family-9 [Medicago truncatula] gi|355487963|gb|AES69166.1|
           F-box family-9 [Medicago truncatula]
          Length = 383

 Score = 53.1 bits (126), Expect(2) = 5e-11
 Identities = 32/98 (32%), Positives = 53/98 (54%)
 Frame = +2

Query: 227 FANFVKHALSHRNNQTEVSVAELTLTGKGTQFVVKSIVNYAYSHNVRQLTMTWVTRNVVE 406
           F  FV   LS RN+ T +   +    G+    +++ I+ YA+SHNV++L +  ++ N+ +
Sbjct: 71  FTKFVSQILSLRNDSTALHTLDFHCRGRLELHILERILKYAFSHNVQRLGVD-LSCNIPQ 129

Query: 407 FPQNLFTSHTLKHLTLATKQIDFCSFGQLPESAWDFPA 520
           FP + F+ HTL  L L   +I F +   L   + D PA
Sbjct: 130 FPLSFFSCHTLTSLDL---RIHFFTLTNLFPDSLDLPA 164



 Score = 38.9 bits (89), Expect(2) = 5e-11
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +1

Query: 1   FLDMKYATQTSKLSRKWKHIWTSMPYLNLNSQAFRTLPQ 117
           FLD K A QT  LS+ WK++W  +P L L  + F+  P+
Sbjct: 31  FLDPKEAVQTCILSKSWKNLWKYLPILKLTFRHFKKNPK 69


>ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|355518439|gb|AET00063.1|
           F-box family-9 [Medicago truncatula]
          Length = 402

 Score = 43.1 bits (100), Expect(2) = 7e-09
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 227 FANFVKHALSHRNNQTEVSVAELTLTGKGTQ-FVVKSIVNYAYSHNVRQLTMTWVTRNVV 403
           F  FV   L+ R++    S+A  +L  +  Q  ++KS+VNYA SHN+++L + +V  ++ 
Sbjct: 81  FNKFVHRVLTLRDS----SLALNSLNFRHNQPRIIKSVVNYAISHNIQRLRL-YVGCHIA 135

Query: 404 EFPQNLFTSHTLKHLTL 454
           + P ++F+  TL HL L
Sbjct: 136 QIPPSVFSCQTLTHLEL 152



 Score = 41.6 bits (96), Expect(2) = 7e-09
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +1

Query: 1   FLDMKYATQTSKLSRKWKHIWTSMPYLNLNSQAFRTLPQF 120
           FL+ K A  TS LS +W+ +W  +P L L+S  FRT+P F
Sbjct: 42  FLNAKQAVTTSILSLRWRDLWKLLPALILDSSDFRTIPIF 81


>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 47.0 bits (110), Expect(2) = 3e-08
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = +2

Query: 227 FANFVKHALSHRNNQTEVSVAELTLTGKGTQFVVKSIVNYAYSHNVRQLTMTWVTRNVVE 406
           F  FV H LSHR++ T +   +         +++K IV YA SH+V+QL ++ V  +   
Sbjct: 67  FTKFVSHVLSHRDDSTALQALDSHRASIVEAYLLKKIVKYAVSHSVQQLQIS-VDADFQC 125

Query: 407 FPQNLFTSHTLKHLTLA 457
           FP   F+ +TL  L L+
Sbjct: 126 FPPCFFSCNTLTSLKLS 142



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 1   FLDMKYATQTSKLSRKWKHIWTSMPYLNLNSQAFRTLPQF 120
           F + K A QT  LS++WK++W  +  L L+++ F T+  F
Sbjct: 28  FFNTKEAAQTCILSKRWKNLWKFVTTLKLSTRHFETIHPF 67


>ref|XP_003597758.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355486806|gb|AES68009.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 45.1 bits (105), Expect(2) = 3e-08
 Identities = 30/89 (33%), Positives = 44/89 (49%)
 Frame = +2

Query: 230 ANFVKHALSHRNNQTEVSVAELTLTGKGTQFVVKSIVNYAYSHNVRQLTMTWVTRNVVEF 409
           A F+ H LS R+  T +   ++         + + I+ YA SHNV+ L M +  R +  F
Sbjct: 136 AEFLSHFLSLRDGSTTIHTLDVHCLYYLEPSLFQMIIKYAISHNVQHLLMNFPCR-IDLF 194

Query: 410 PQNLFTSHTLKHLTLATKQIDFCSFGQLP 496
           P   F+ HTL  L L+   I    FGQ+P
Sbjct: 195 PSCFFSCHTLTSLNLSGYDI---LFGQIP 220



 Score = 37.4 bits (85), Expect(2) = 3e-08
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +1

Query: 1   FLDMKYATQTSKLSRKWKHIWTSMPYLNLNSQAFRT 108
           FL+ K A QT  LS++W  +W  +P + L+S  FRT
Sbjct: 96  FLNAKEAAQTCILSKRWITLWKGLPTITLSSSNFRT 131


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