BLASTX nr result

ID: Atractylodes22_contig00003039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003039
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   162   3e-38
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   159   3e-37
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   156   3e-36
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   131   1e-28
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                 81   1e-13

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  162 bits (411), Expect = 3e-38
 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
 Frame = -2

Query: 384 MAVKKVELPTFDGEDPVGWITWAETYFKIQNTDEAMKVKLAKLSMEGLTIHWFNLFCETT 205
           +A KKV+LP FDG+DPV WIT AE YF +Q+T + M+VKLA+LSMEG TIHWFNL  ET 
Sbjct: 69  LAGKKVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETE 128

Query: 204 DDPFLRAFKRALIERYGGKQTGNPFEELKDLKQTGTV-EYIADFEYISSWVGRLPEEQYL 28
           D+      KRALI RYGG++  NPFEEL  L+Q G+V E++  FE +SS VGRLPEEQYL
Sbjct: 129 DELSWENLKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYL 188

Query: 27  GYFVGGLR 4
           GYF+ GL+
Sbjct: 189 GYFMSGLK 196


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  159 bits (403), Expect = 3e-37
 Identities = 78/129 (60%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
 Frame = -2

Query: 384  MAVKKVELPTFDGEDPVGWITWAETYFKIQNTDEAMKVKLAKLSMEGLTIHWFNLFCETT 205
            +A KKV+LP F+G+DPV WIT AE YF +QNT + M+VKL++LSMEG TIHWFNL  ET 
Sbjct: 742  LAGKKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETE 801

Query: 204  DDPFLRAFKRALIERYGGKQTGNPFEELKDLKQTGTV-EYIADFEYISSWVGRLPEEQYL 28
            DD      K+ALI RY G++  NPFEEL  L+Q G+V E++  FE +SS VGRLPEEQYL
Sbjct: 802  DDLSREKLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYL 861

Query: 27   GYFVGGLRS 1
            GYF+ GL++
Sbjct: 862  GYFMSGLKA 870


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  156 bits (394), Expect = 3e-36
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 375 KKVELPTFDGEDPVGWITWAETYFKIQNTDEAMKVKLAKLSMEGLTIHWFNLFCETTDDP 196
           KKV+LP F+G+D V WIT  E YF +QNT + M+VKLA+LSMEG TIHWFNL  ET D+ 
Sbjct: 55  KKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDEL 114

Query: 195 FLRAFKRALIERYGGKQTGNPFEELKDLKQTGTV-EYIADFEYISSWVGRLPEEQYLGYF 19
                KRALI RYGG++  NPFEEL  ++Q G+V E++  FE +SS VGRLPEEQYLGYF
Sbjct: 115 SWEKLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYF 174

Query: 18  VGGLR 4
           + GL+
Sbjct: 175 MSGLK 179


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score =  131 bits (329), Expect = 1e-28
 Identities = 67/128 (52%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
 Frame = -2

Query: 384 MAVKKVELPTFDGEDPVGWITWAETYFKIQNTDEAMKVKLAKLSMEGLTIHWFNLFCETT 205
           ++VKKVEL  F+G+DP GWI  AE YF +QNT   +KV LA+L M+G TIH+F    E  
Sbjct: 79  LSVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEEN 138

Query: 204 DDPFLRAFKRALIERYGGKQTGNPFEELKDLKQTGTV-EYIADFEYISSWVGRLPEEQYL 28
           +       K AL+ERYGG   GN FE+L  L+Q GT+ EYIADFE + + + +LP +QYL
Sbjct: 139 ETLTWEDLKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYL 198

Query: 27  GYFVGGLR 4
           GYFV GL+
Sbjct: 199 GYFVHGLK 206


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
 Frame = -2

Query: 375 KKVELPTFDGEDPVGWITWAETYFKIQNTDEAMKVKLAKLSMEGLTIHWFNLFCETTDDP 196
           ++V++P F+G D  GW+T  E +F++   +EA K+++  ++ME   + WF  + E T + 
Sbjct: 106 RRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGWFQWWEEQTLER 165

Query: 195 FLRAFKRALIERYGGKQTGNPFEELKDLKQTGTV-EYIADFEYISSWVGRLPEEQYLGYF 19
               FK+AL  R+      NPF  L  +KQ G+V EY  +FE +++ +     E   G F
Sbjct: 166 AWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMRNADREVLKGVF 225

Query: 18  VGGLR 4
           + GL+
Sbjct: 226 LNGLQ 230


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