BLASTX nr result

ID: Atractylodes22_contig00003027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003027
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU82549.1| nematode resistance-like protein, partial [Artemi...   110   9e-23
ref|XP_003601022.1| TMV resistance protein N [Medicago truncatul...    93   2e-17
ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vi...    91   1e-16
gb|AAN73008.1| NBS-LRR resistance protein RAS4-5 [Helianthus ann...    88   8e-16
gb|AEI27415.1| TIR_2 [Helianthus annuus]                               87   1e-15

>gb|AFU82549.1| nematode resistance-like protein, partial [Artemisia tridentata]
          Length = 162

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/94 (62%), Positives = 70/94 (74%)
 Frame = -1

Query: 284 VGKISLELPSIKFSDVEKFIGMDGRVEDVVSSLKTGVNEVHMIGIWGMGGAGKTTLAKAV 105
           V  IS +L S+ F   E+ +GM  R+ +VVSSL   V++V M+GIWGMGGAGKTTLAKAV
Sbjct: 1   VQDISRDLHSVDFILDEELVGMGTRIREVVSSLAINVDDVRMLGIWGMGGAGKTTLAKAV 60

Query: 104 FDQISHQFKHKSFVEDVRESVSKDPSGLKSLQKQ 3
           FDQIS QF+ KSFVE+VRE      SGLKSLQKQ
Sbjct: 61  FDQISFQFEGKSFVENVREESKPSLSGLKSLQKQ 94


>ref|XP_003601022.1| TMV resistance protein N [Medicago truncatula]
           gi|355490070|gb|AES71273.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 868

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 71/102 (69%)
 Frame = -1

Query: 308 EAEFIDEIVGKISLELPSIKFSDVEKFIGMDGRVEDVVSSLKTGVNEVHMIGIWGMGGAG 129
           EA+ + +IV ++  +L S   S  E  +G++ RVE+++  +    N+V MIGIWGMGG+G
Sbjct: 28  EADLVKKIVKEVLTKLDSTHLSITEFPVGLESRVEELIEFIDDQSNKVCMIGIWGMGGSG 87

Query: 128 KTTLAKAVFDQISHQFKHKSFVEDVRESVSKDPSGLKSLQKQ 3
           KTT AKA+++QI+ +F  +SF+E++RE   KD +G+  LQ+Q
Sbjct: 88  KTTTAKAIYNQINRKFADRSFIENIREICEKDNTGIIRLQEQ 129


>ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = -1

Query: 332 SGFSLKG-DEAEFIDEIVGKISLELPSIKFSDVEK-FIGMDGRVEDVVSSLKTGVNEVHM 159
           SGF L+   EAEFI++I+G+I   +P  K  DV K  +GMDG ++ V S +    NEV M
Sbjct: 163 SGFPLQDRSEAEFIEDIIGEIRRLIP--KLVDVGKNMVGMDGNLKQVKSLIDAQSNEVSM 220

Query: 158 IGIWGMGGAGKTTLAKAVFDQISHQFKHKSFVEDVRESVSKDPSGLKSLQKQ 3
           +GI+G+GG GKTT+AK V++ + ++FK  SF+E+VRE  SK   GL  LQ++
Sbjct: 221 VGIYGIGGIGKTTIAKVVYNDMLYKFKRHSFLENVREK-SKGGRGLLELQEK 271


>gb|AAN73008.1| NBS-LRR resistance protein RAS4-5 [Helianthus annuus]
          Length = 223

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/101 (45%), Positives = 67/101 (66%)
 Frame = -1

Query: 308 EAEFIDEIVGKISLELPSIKFSDVEKFIGMDGRVEDVVSSLKTGVNEVHMIGIWGMGGAG 129
           EA+ I +IVG IS  L S+  +D +  IG++ R++D++S L+     V M+GIWG+GG G
Sbjct: 5   EAKCISDIVGTISSRLSSLNTNDNKDLIGIETRLQDLISKLEIESGGVRMVGIWGVGGGG 64

Query: 128 KTTLAKAVFDQISHQFKHKSFVEDVRESVSKDPSGLKSLQK 6
           KTTLA A + +ISH F+    +E++RE  SK   GLK LQ+
Sbjct: 65  KTTLASAAYMEISHLFEGCCLLENIREESSK--QGLKKLQE 103


>gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/102 (46%), Positives = 66/102 (64%)
 Frame = -1

Query: 308 EAEFIDEIVGKISLELPSIKFSDVEKFIGMDGRVEDVVSSLKTGVNEVHMIGIWGMGGAG 129
           EA+ I +IVG IS  L S+  +D +  IGM+ R+ D+   L+ G   V M+GIWG+GG G
Sbjct: 225 EAQCISDIVGTISSRLSSLNTNDNKDLIGMETRLRDLKLMLEIGSGGVRMVGIWGVGGGG 284

Query: 128 KTTLAKAVFDQISHQFKHKSFVEDVRESVSKDPSGLKSLQKQ 3
           KTTLA A + +ISH F+    +E++RE  SK   GLK LQ++
Sbjct: 285 KTTLASAAYMEISHLFEACCLLENIREESSK--HGLKKLQEK 324


Top