BLASTX nr result

ID: Atractylodes22_contig00002451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002451
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863352.1| hypothetical protein ARALYDRAFT_494259 [Arab...   148   2e-33
ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro...   147   4e-33
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]   147   4e-33
gb|ABD65070.1| plastid ribosomal protein L19, putative [Brassica...   144   3e-32
ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|1...   142   2e-31

>ref|XP_002863352.1| hypothetical protein ARALYDRAFT_494259 [Arabidopsis lyrata subsp.
           lyrata] gi|297309187|gb|EFH39611.1| hypothetical protein
           ARALYDRAFT_494259 [Arabidopsis lyrata subsp. lyrata]
          Length = 222

 Score =  148 bits (374), Expect = 2e-33
 Identities = 101/222 (45%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
 Frame = -2

Query: 940 ASIVLPQALFMIPTNVGRFQSKKLGVSSFLPPFNPAXXXXXXXXXSRCRFDSGFL----N 773
           +S +LPQAL MIP  +  F SK LGVSS LP  + +              + GF      
Sbjct: 4   SSHLLPQALHMIP-RIPTFSSKNLGVSSILPRASSSKSRLSVSTNHSSS-NFGFAIDSKK 61

Query: 772 RDSFVVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIVKLGNIMGILNKQAI 593
           R  F+VRA                                     VKLG+IMG+LNK+AI
Sbjct: 62  RREFIVRAEESTEGETEAVVENAVEAEAEAAVAEEEARPPRKTR-VKLGDIMGLLNKKAI 120

Query: 592 EASESSRPVPDLRTGDIIEIKLEVPENRRRLSIYKGIIISRQNXXXXXXXXXXXXXXXXX 413
           E +E+ RPVP LRTGDI+EIKLEVPEN+RRLSIYKGI++SRQN                 
Sbjct: 121 EVAENVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 180

Query: 412 XXXVFPIFSPNIKEIXXXXXXXXXRARLYYLRDKLPRLSTFK 287
              VFPI+SPNIKEI         RARLYYLRDKLPRLSTFK
Sbjct: 181 VEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 222


>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
           vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
           product [Vitis vinifera]
          Length = 231

 Score =  147 bits (371), Expect = 4e-33
 Identities = 79/117 (67%), Positives = 86/117 (73%)
 Frame = -2

Query: 637 VKLGNIMGILNKQAIEASESSRPVPDLRTGDIIEIKLEVPENRRRLSIYKGIIISRQNXX 458
           VKLG+IMGILNK+AIEASE  RPVPDLRTGDI+EIKLEVPENRRRLSIYKGI+IS+QN  
Sbjct: 115 VKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAG 174

Query: 457 XXXXXXXXXXXXXXXXXXVFPIFSPNIKEIXXXXXXXXXRARLYYLRDKLPRLSTFK 287
                             VFP++SPNIKEI         RARLYYLRDKLPRLSTFK
Sbjct: 175 IHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
          Length = 231

 Score =  147 bits (371), Expect = 4e-33
 Identities = 79/117 (67%), Positives = 86/117 (73%)
 Frame = -2

Query: 637 VKLGNIMGILNKQAIEASESSRPVPDLRTGDIIEIKLEVPENRRRLSIYKGIIISRQNXX 458
           VKLG+IMGILNK+AIEASE  RPVPDLRTGDI+EIKLEVPENRRRLSIYKGI+IS+QN  
Sbjct: 115 VKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAG 174

Query: 457 XXXXXXXXXXXXXXXXXXVFPIFSPNIKEIXXXXXXXXXRARLYYLRDKLPRLSTFK 287
                             VFP++SPNIKEI         RARLYYLRDKLPRLSTFK
Sbjct: 175 IHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRARLYYLRDKLPRLSTFK 231


>gb|ABD65070.1| plastid ribosomal protein L19, putative [Brassica oleracea]
          Length = 224

 Score =  144 bits (363), Expect = 3e-32
 Identities = 101/224 (45%), Positives = 116/224 (51%), Gaps = 6/224 (2%)
 Frame = -2

Query: 940 ASIVLPQALFMIPTNVGRFQSKKLGVSSF---LPPFNP---AXXXXXXXXXSRCRFDSGF 779
           +S + PQAL MIP N  +  SKKLG SSF    P  NP             S+  F    
Sbjct: 4   SSHLFPQALHMIPRNPTQ-PSKKLGFSSFQSCAPSMNPRLTVSRVSLNHSVSKSGFSLDA 62

Query: 778 LNRDSFVVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIVKLGNIMGILNKQ 599
             R   +VRA                                     VKLG++MGILN++
Sbjct: 63  KARREVLVRAEGEGEGEAVDANADTEGNVEDVVEAGEVKAPKKTR--VKLGDVMGILNQK 120

Query: 598 AIEASESSRPVPDLRTGDIIEIKLEVPENRRRLSIYKGIIISRQNXXXXXXXXXXXXXXX 419
           AIE SE  RPVP++RTGDI+EIKLEVPENRRRLSIYKGI++SRQN               
Sbjct: 121 AIEVSEKLRPVPEIRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 180

Query: 418 XXXXXVFPIFSPNIKEIXXXXXXXXXRARLYYLRDKLPRLSTFK 287
                VFPI+SPNIKEI         RARLYYLRDKLPRLSTFK
Sbjct: 181 IGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 224


>ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|118483873|gb|ABK93827.1|
           unknown [Populus trichocarpa]
           gi|222833795|gb|EEE72272.1| predicted protein [Populus
           trichocarpa]
          Length = 241

 Score =  142 bits (357), Expect = 2e-31
 Identities = 74/117 (63%), Positives = 85/117 (72%)
 Frame = -2

Query: 637 VKLGNIMGILNKQAIEASESSRPVPDLRTGDIIEIKLEVPENRRRLSIYKGIIISRQNXX 458
           VKLG+I+GILNK+A+E SE  RP+PD+RTGDI+EIKLEVPENRRRLSIYKGI+IS+QN  
Sbjct: 125 VKLGDIIGILNKRAVETSEMERPIPDIRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAG 184

Query: 457 XXXXXXXXXXXXXXXXXXVFPIFSPNIKEIXXXXXXXXXRARLYYLRDKLPRLSTFK 287
                             VFP++SPNIKEI         RARLYYLRDKLPRLSTFK
Sbjct: 185 IHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVIKHRKVRRARLYYLRDKLPRLSTFK 241


Top