BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002416
         (3152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So...   511   e-142
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...   504   e-140
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...   503   e-139
emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni...   497   e-138
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni...   496   e-137

>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score =  511 bits (1317), Expect = e-142
 Identities = 290/514 (56%), Positives = 355/514 (69%), Gaps = 33/514 (6%)
 Frame = +1

Query: 1120 HNHNSHPVDSCGVVVSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSE 1299
            H  N   +D     V+Q ASDDAYSFNQRPIE++      +  N GGY+++NV + ++ E
Sbjct: 52   HTSNGRHIDE-SPAVTQTASDDAYSFNQRPIESTTNV---DGLNFGGYLTFNVVSYNKGE 107

Query: 1300 INELRKKLLSDLERIRSLNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPFGSSNKE 1470
            +NELR +LL+++E+IR+L DRI++G L   NPRS  GK KKLSGNKR   S     S+K+
Sbjct: 108  VNELRSRLLAEVEQIRNLKDRIESGQLSTTNPRSQ-GKSKKLSGNKRPTPS----GSSKD 162

Query: 1471 SKHLRQGLVN-------GSAGGEA--EENLLKMCRQVLTKLMKHKLSWVFNKPVDAVAFG 1623
             K L  G+ N       G  G +A   E+++K CRQ+L KLMKHK  W+FN PVDA A G
Sbjct: 163  PKKLPNGVENRNFGNPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALG 222

Query: 1624 LHDYHQIIKRPMDLGTVKSNLSKNMYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQL 1803
            LHDYHQIIKRP+DLGTVKSNL+KN Y SP +FA+DVRL F NA+LYNP+TD+V+G A+QL
Sbjct: 223  LHDYHQIIKRPIDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQL 282

Query: 1804 LTHFEELFRPIQAKL-ATHHHVNEFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISN 1980
            L  FE++FRP+Q K+        ++  VDEL GSSW+ I TPER KK K++   VP IS 
Sbjct: 283  LGRFEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKATP--VPHISK 340

Query: 1981 KQ----NHSTASNPLIPPVV-------QSPVRTPSPMQAAEPIKPSSASTRGAVGKQPKP 2127
            KQ    NHS+AS P +P          QSP+ TPSP++A  P KP SA+   A+GKQPKP
Sbjct: 341  KQERMQNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAP-PSKPESAAKVPAMGKQPKP 399

Query: 2128 RAKDPNKREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDT 2307
            RAKDPNKR MNMEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDT
Sbjct: 400  RAKDPNKRVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDT 459

Query: 2308 ETLWELDRFVTNWKKLVSKTKRQALLVN--------XXXXXXXXXXXXXXXXXXXEKVDG 2463
            ETLWELDRFVTNWKK+VSKTKRQAL++N                           EK D 
Sbjct: 460  ETLWELDRFVTNWKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDS 519

Query: 2464 MKKNKK-EAGEEDVDIGDEMPESSFPHVEIEKDD 2562
             KK KK + GEEDV+I D+ P + FP VEIEKD+
Sbjct: 520  FKKPKKGDVGEEDVEIEDDEPATHFPPVEIEKDE 553


>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
            gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
            protein Virp1a [Solanum lycopersicum]
            gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
            protein Virp1b [Solanum lycopersicum]
            gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
            protein Virp1c [Solanum lycopersicum]
            gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
            protein Virp1d [Solanum lycopersicum]
            gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
            gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score =  504 bits (1298), Expect = e-140
 Identities = 287/513 (55%), Positives = 352/513 (68%), Gaps = 32/513 (6%)
 Frame = +1

Query: 1120 HNHNSHPVDSCGVVVSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSE 1299
            H  N   +D     V+Q ASDDAYSFNQRPIE++      +  N GGY+++NV + +++E
Sbjct: 52   HTSNGRHMDD-SPAVTQTASDDAYSFNQRPIESTTNV---DGLNFGGYLTFNVVSYNKAE 107

Query: 1300 INELRKKLLSDLERIRSLNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPFGSSNKE 1470
            +NELR +L++++E+IR+L DRI++G L   NPRS  GK KK SGNKR   S     S+K+
Sbjct: 108  VNELRSRLMAEVEQIRNLKDRIESGQLSTTNPRSQ-GKSKKQSGNKRPTPS----GSSKD 162

Query: 1471 SKHLRQGLVN---GSAGGE------AEENLLKMCRQVLTKLMKHKLSWVFNKPVDAVAFG 1623
             K L  G+ N   G+ GG         E+++K CRQ+L KLMKHK  W+FN PVDA A G
Sbjct: 163  LKKLPNGVENRNFGNPGGVDGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALG 222

Query: 1624 LHDYHQIIKRPMDLGTVKSNLSKNMYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQL 1803
            LHDYHQIIKRPMDLGTVKSNL+KN Y SP +FA+DVRL F NA+LYNP+TD+V+  A+QL
Sbjct: 223  LHDYHQIIKRPMDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQL 282

Query: 1804 LTHFEELFRPIQAKL-ATHHHVNEFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISN 1980
            L  FE++FRP+Q K+        ++  VDEL GSSW+ I TPER KK K +   VP+IS 
Sbjct: 283  LGRFEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKPTP--VPNISK 340

Query: 1981 KQ----NHSTASNPLIPPVV-------QSPVRTPSPMQAAEPIKPSSASTRGAVGKQPKP 2127
            KQ    NHS+AS P +P          QSP+ TPSP++A    KP SA+    +GKQPKP
Sbjct: 341  KQERMQNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAPAA-KPQSAAKVPTMGKQPKP 399

Query: 2128 RAKDPNKREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDT 2307
            RAKDPNKREMNMEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDT
Sbjct: 400  RAKDPNKREMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDT 459

Query: 2308 ETLWELDRFVTNWKKLVSKTKRQALLVN-------XXXXXXXXXXXXXXXXXXXEKVDGM 2466
            ETLWELDRFVTNWKK+VSKTKRQAL+ N                          EK D  
Sbjct: 460  ETLWELDRFVTNWKKMVSKTKRQALMNNLGPPSASAAASAATTSVAEADGPTTSEKNDSF 519

Query: 2467 KKNKK-EAGEEDVDIGDEMPESSFPHVEIEKDD 2562
            KK KK + GEEDV+I D+ P + FP VEIEKD+
Sbjct: 520  KKAKKGDVGEEDVEIEDDEPATHFPPVEIEKDE 552


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score =  503 bits (1295), Expect = e-139
 Identities = 300/531 (56%), Positives = 357/531 (67%), Gaps = 45/531 (8%)
 Frame = +1

Query: 1102 AINGRPHNHNSHPVDSCGVVVSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVA 1281
            A NGR HN  S         V+Q ASDDAYSFNQRPIE+S      +  N GGY++YNVA
Sbjct: 53   ASNGR-HNDESP-------AVTQTASDDAYSFNQRPIESSTNV---DGLNLGGYMTYNVA 101

Query: 1282 ACSRSEINELRKKLLSDLERIRSLNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPF 1452
            + +++E++ELR +L+++LE+IR+L DRI++G L   NPRS +GK KKLSGNKR   S   
Sbjct: 102  SYNKTELHELRSRLVAELEQIRNLKDRIESGQLSTSNPRS-HGKSKKLSGNKRPTPS--- 157

Query: 1453 GSSNKESKHLRQGLVN------GSAGGE----AEENLLKMCRQVLTKLMKHKLSWVFNKP 1602
              S+K+ K L  G+ N      G  GG       EN++K CRQVL KLMKHK  W+FN P
Sbjct: 158  -GSSKDRKKLLNGVDNRNFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTP 216

Query: 1603 VDAVAFGLHDYHQIIKRPMDLGTVKSNLSKNMYASPLDFASDVRLVFENAMLYNPRTDEV 1782
            VDA A GLHDYHQIIKRPMDLGTVKSNL  N Y +P +FA+DVRL F NA+LYNP+TD+V
Sbjct: 217  VDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTDQV 276

Query: 1783 HGMADQLLTHFEELFRPIQAKLATHHHVN---EFSAVDELDGSSWDDIQTPERSKKLKSS 1953
            HG A+QLL  FE++FRPIQ KL          +F A+DEL GSSW+ I TPER KK K +
Sbjct: 277  HGFAEQLLARFEDMFRPIQDKLNKLDGGTGRRDFRAIDELQGSSWNHIPTPERVKKPKPT 336

Query: 1954 GPVVPSISNKQ-----NHSTASNPLIP--------PVV--QSPVRTPSPMQAAEPIKPSS 2088
                P IS KQ     NHS+AS P +P        PVV  QSP+ TPSP++A    KP S
Sbjct: 337  P--APHISKKQERMMQNHSSASTPSLPVQQPPDNPPVVRQQSPLSTPSPVRAPPAAKPQS 394

Query: 2089 --ASTRGAVGKQPKPRAKDPNKREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLA 2262
              A+    +GKQPKPRAKDPNKREM+MEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLA
Sbjct: 395  SVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLA 454

Query: 2263 QEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALLVN---------XXXXXXXX 2415
            Q+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQAL+ N                 
Sbjct: 455  QDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTT 514

Query: 2416 XXXXXXXXXXXEKVDGMKKNKK--EAG-EEDVDIGDEMPESSFPHVEIEKD 2559
                       EK D  KK KK  +AG E+DV+I D+ P + FP VEIE D
Sbjct: 515  SVAEADGPSTSEKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPVEIEID 565


>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana benthamiana]
          Length = 613

 Score =  497 bits (1279), Expect = e-138
 Identities = 290/510 (56%), Positives = 352/510 (69%), Gaps = 43/510 (8%)
 Frame = +1

Query: 1162 VSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSEINELRKKLLSDLER 1341
            V+Q ASDDAYSFNQRPIE+S      +  N GGY++YNVA+ S++E+++LR +L+++LE+
Sbjct: 65   VTQTASDDAYSFNQRPIESSANV---DGLNLGGYMTYNVASYSKTELHDLRSRLVAELEQ 121

Query: 1342 IRSLNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPFGSSNKESKHLRQGLVN---G 1503
            IR+L DRI++G L   NPRS +GK KKLSGNKR   S     S+K+ K L  G+ N   G
Sbjct: 122  IRNLKDRIESGQLSTSNPRS-HGKSKKLSGNKRPTPS----GSSKDPKKLPNGVDNRNFG 176

Query: 1504 SAGGEAE------ENLLKMCRQVLTKLMKHKLSWVFNKPVDAVAFGLHDYHQIIKRPMDL 1665
            + GG         EN++K CRQVL KLMKHK  W+FN PVDA A GLHDY QIIKRPMDL
Sbjct: 177  NPGGGGVKGIIGMENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDL 236

Query: 1666 GTVKSNLSKNMYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQLLTHFEELFRPIQAK 1845
            GTVKSNLS N+Y +P +FA+DVRL F NA+LYNP+TD+VH  A+ LLT FE++FRP Q K
Sbjct: 237  GTVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFEDMFRPFQDK 296

Query: 1846 LATHHHVN---EFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISNKQ-----NHSTA 2001
            L      +   +F A+DEL GSSW+ I TPER KK K +    P IS KQ     NHS+A
Sbjct: 297  LNKLDGGSGRRDFHAIDELQGSSWNHIPTPERVKKPKPTP--APHISKKQERMMQNHSSA 354

Query: 2002 SNPLIP--------PVVQ--SPVRTPSPMQAAEPIKPSS--ASTRGAVGKQPKPRAKDPN 2145
            S P +P        PVVQ  SP+ TPSP++A    KP S  A+    + KQPKPRAKDPN
Sbjct: 355  STPSLPVQQPPDNPPVVQQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMEKQPKPRAKDPN 414

Query: 2146 KREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDTETLWEL 2325
            KREM+MEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDTETLWEL
Sbjct: 415  KREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWEL 474

Query: 2326 DRFVTNWKKLVSKTKRQALLVN--------XXXXXXXXXXXXXXXXXXXEKVDGMKKNKK 2481
            DRFVTNWKK+VSKTKRQAL+ N                           EK D  KK KK
Sbjct: 475  DRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTSVAEADGPSTSEKNDSFKKPKK 534

Query: 2482 --EAG-EEDVDIGDEMPESSFPHVEIEKDD 2562
              +AG E+DV+I D+ P + FP VEI+KD+
Sbjct: 535  GGDAGDEDDVEIEDDEPATQFPPVEIDKDE 564


>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
          Length = 616

 Score =  496 bits (1278), Expect = e-137
 Identities = 290/510 (56%), Positives = 350/510 (68%), Gaps = 44/510 (8%)
 Frame = +1

Query: 1162 VSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSEINELRKKLLSDLER 1341
            V+Q ASDDAYSFNQRPIE+S      +  N GGY++YN A+ +++E++ELR +L+++LE+
Sbjct: 65   VTQTASDDAYSFNQRPIESSTNV---DGLNLGGYMTYNXASYNKTELHELRSRLVAELEQ 121

Query: 1342 IRSLNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPFGSSNKESKHLRQGLVN---G 1503
            IR+L DRI++G L   NPRS +GK KKLSGNKR   S     S+K+ K L  G+ N   G
Sbjct: 122  IRNLKDRIESGQLSTSNPRS-HGKSKKLSGNKRPTPS----GSSKDPKKLPNGVDNRNFG 176

Query: 1504 SAGGEA------EENLLKMCRQVLTKLMKHKLSWVFNKPVDAVAFGLHDYHQIIKRPMDL 1665
            + GG        +EN++K C QVL KLMKHK  W+FN PVDA A GLHDYHQIIKRP DL
Sbjct: 177  NPGGGGVKGIIGKENMMKECTQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDL 236

Query: 1666 GTVKSNLSKNMYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQLLTHFEELFRPIQAK 1845
            GT KSNLS N Y +P +FA+DVRL F NA+LYNP+TD+VHG A+QLL  FE++FRPIQ K
Sbjct: 237  GTXKSNLSNNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDK 296

Query: 1846 LATHHHVN---EFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISNKQ-----NHSTA 2001
            L      +   +F A+DEL GSSW+ I TPER KK K +    P IS KQ     NHS+A
Sbjct: 297  LNKLDGGSGRRDFHAIDELQGSSWNHIPTPERVKKPKPTP--APHISKKQERMMQNHSSA 354

Query: 2002 SNPLIP--------PVV--QSPVRTPSPMQAAEPIKPSS--ASTRGAVGKQPKPRAKDPN 2145
            S P +P        PVV  QSP+ TPSP++A    KP S  A+    +GKQPKPRAKDPN
Sbjct: 355  STPSLPVQQPPDNPPVVRQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPN 414

Query: 2146 KREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDTETLWEL 2325
            KREM+MEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDTETLWEL
Sbjct: 415  KREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWEL 474

Query: 2326 DRFVTNWKKLVSKTKRQALLVN---------XXXXXXXXXXXXXXXXXXXEKVDGMKKNK 2478
            DRFVTNWKK+VSKTKRQAL+ N                            EK D  KK K
Sbjct: 475  DRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTTSVAEADGPSTSEKNDSFKKPK 534

Query: 2479 K--EAG-EEDVDIGDEMPESSFPHVEIEKD 2559
            K  +AG E+DV+I D+ P + FP VEIE D
Sbjct: 535  KGGDAGDEDDVEIEDDEPATHFPPVEIEID 564