BLASTX nr result
ID: Atractylodes22_contig00002348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00002348
(653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34639.3| unnamed protein product [Vitis vinifera] 178 9e-43
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9... 178 9e-43
dbj|BAF98996.1| nucleoporin 98 [Daucus carota] 146 4e-33
ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup9... 111 1e-22
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9... 111 1e-22
>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
Length = 1047
Score = 178 bits (451), Expect = 9e-43
Identities = 110/235 (46%), Positives = 125/235 (53%), Gaps = 18/235 (7%)
Frame = +1
Query: 1 EKSHEELRWEDYQLGDKGGPIPAGQSSGGIGFNTSNTQXXXXXXXXXXXXXXXXXXXXXX 180
+KSHEELRWEDYQLGDKGGP PA QS+GG+GF SNTQ
Sbjct: 372 DKSHEELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAFGQSSANPFSSST 431
Query: 181 XXXXXXXXXXIFSTPGFG-------SSTPSLGASASNPFGSTPSPTPSVF--CSTPGFGA 333
F + GFG SS+P +S SNPFGST S TPS+F STP FGA
Sbjct: 432 SSNPFAPRTPAFGSSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSIFGASSTPPFGA 491
Query: 334 TTSAYLXXXXXXXXXXXXXXXXXXXQAQGETPSFSTGLNFSNTQSSPLFHSSIPSLGQTS 513
++S L AQG P+F +GLNF NTQSSPLF SS PSLGQT+
Sbjct: 492 SSSPSLFGASSSSGFGSSPSIFGSTPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTA 551
Query: 514 FPVGQSAPAFGQS-TPAFGQSN-------GFGGNLF-XXXXXXXXXXXMGFNQTT 651
GQS AFGQS TP+FGQS+ GFGGNLF +GF QTT
Sbjct: 552 SAFGQSTSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSAPPLLSTSNPVGFGQTT 606
>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
[Vitis vinifera]
Length = 1013
Score = 178 bits (451), Expect = 9e-43
Identities = 110/235 (46%), Positives = 125/235 (53%), Gaps = 18/235 (7%)
Frame = +1
Query: 1 EKSHEELRWEDYQLGDKGGPIPAGQSSGGIGFNTSNTQXXXXXXXXXXXXXXXXXXXXXX 180
+KSHEELRWEDYQLGDKGGP PA QS+GG+GF SNTQ
Sbjct: 355 DKSHEELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAFGQSSANPFSSST 414
Query: 181 XXXXXXXXXXIFSTPGFG-------SSTPSLGASASNPFGSTPSPTPSVF--CSTPGFGA 333
F + GFG SS+P +S SNPFGST S TPS+F STP FGA
Sbjct: 415 SSNPFAPRTPAFGSSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSIFGASSTPPFGA 474
Query: 334 TTSAYLXXXXXXXXXXXXXXXXXXXQAQGETPSFSTGLNFSNTQSSPLFHSSIPSLGQTS 513
++S L AQG P+F +GLNF NTQSSPLF SS PSLGQT+
Sbjct: 475 SSSPSLFGASSSSGFGSSPSIFGSTPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTA 534
Query: 514 FPVGQSAPAFGQS-TPAFGQSN-------GFGGNLF-XXXXXXXXXXXMGFNQTT 651
GQS AFGQS TP+FGQS+ GFGGNLF +GF QTT
Sbjct: 535 SAFGQSTSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSAPPLLSTSNPVGFGQTT 589
Score = 60.8 bits (146), Expect = 2e-07
Identities = 49/124 (39%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +1
Query: 217 STPGFGS-STPSLGASASNPFGSTPSPTPSVFCSTPGFGATTSAYLXXXXXXXXXXXXXX 393
STP FG+ STP+ GA++++ FGSTPSPT FG+T SA+
Sbjct: 172 STPAFGATSTPAFGATSTSAFGSTPSPT---------FGSTGSAF-------GGSGAPVF 215
Query: 394 XXXXXQAQGETPSF-STGLNFSNTQSSPLF-HSSIPSLGQTSFPVGQ--SAPAFGQSTPA 561
TP F S+ + T S+P F SS P+ G +S P S PAFGQST A
Sbjct: 216 ASSGAFGASSTPVFGSSTTSAFGTSSTPAFGASSTPAFGASSTPSFSFGSTPAFGQSTAA 275
Query: 562 FGQS 573
FG S
Sbjct: 276 FGSS 279
>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
Length = 1005
Score = 146 bits (368), Expect = 4e-33
Identities = 99/234 (42%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Frame = +1
Query: 1 EKSHEELRWEDYQLGDKGGPIPAGQSSGGIGFNTSNTQXXXXXXXXXXXXXXXXXXXXXX 180
+KSHEELRWEDYQLGDKGGP A Q +G GF T NTQ
Sbjct: 356 DKSHEELRWEDYQLGDKGGPNSAAQPAGAAGFGT-NTQPNPFSSSSTFGQASAPANPFSS 414
Query: 181 XXXXXXXXXXI--FSTPGFGSSTPSLGASA------SNPFGSTPSPTPSVFCSTPG-FGA 333
FSTPGF +ST + G+SA +NPFGST S PS+F ST FG
Sbjct: 415 NNATNPFGQKSAPFSTPGFAASTSAFGSSAFGSTTNANPFGSTSSAAPSLFGSTTSTFGG 474
Query: 334 TTSAYLXXXXXXXXXXXXXXXXXXXQAQGETPS-FSTGLNFSNTQSSPLFHSSIPSLGQT 510
T ++ AQG T S F++GLNF NTQ SPLF S+ PS+GQ+
Sbjct: 475 TPASPFGSAATTSAFGTSTSIFGSTSAQGTTSSPFNSGLNFGNTQQSPLFQSNTPSIGQS 534
Query: 511 SFPVGQSAPAFGQSTPAFGQSN-------GFGGNLF-XXXXXXXXXXXMGFNQT 648
S GQ+ P+FGQ+TP FGQ+N GFG N+F MGF QT
Sbjct: 535 SSAFGQT-PSFGQTTPGFGQANMFNTPSTGFGANMFSTTPSLLTTSSQMGFGQT 587
Score = 57.0 bits (136), Expect = 3e-06
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 217 STPGFGSSTPSLGASASNPFGSTPSPT---PSVFCSTPGFGATTSAYLXXXXXXXXXXXX 387
S+P FGSS P+ GAS+++ FG+T S + SVF P FG S+
Sbjct: 80 SSPAFGSSVPAFGASSTSGFGNTSSSSFGGSSVFGQKPSFGGFGSS-TTQTSPFGSTFQQ 138
Query: 388 XXXXXXXQAQGETPSFSTGLNFSNTQSSPLF-HSSIPSLGQTSFPV--GQSAPAFGQ-ST 555
G TP + + + S+P F SS P+ G T+ P S+PAFG ST
Sbjct: 139 SQPAFGSNLFGSTPFGGSSQSAFSAPSTPTFGSSSTPAFGATNTPAFGATSSPAFGSVST 198
Query: 556 PAFGQS-NGFG 585
P FG + N FG
Sbjct: 199 PTFGSTGNAFG 209
>ref|XP_003543180.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 2
[Glycine max]
Length = 1010
Score = 111 bits (277), Expect = 1e-22
Identities = 81/234 (34%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Frame = +1
Query: 1 EKSHEELRWEDYQLGDKGGPIPAGQSSGGIGFNTSNTQXXXXXXXXXXXXXXXXXXXXXX 180
+KSHEELRWEDYQLGDKGG +P+ QS+G GF +S TQ
Sbjct: 374 DKSHEELRWEDYQLGDKGGSLPSTQSTGLTGFGSSTTQTNAFSPSPVFGQSSANPFSSTA 433
Query: 181 XXXXXXXXXXIFSTPGFGSSTP----------SLGASASNPFGSTPSPTPSVFCSTPGFG 330
+ GFG+S S A+A + FGS+PSP + STPGFG
Sbjct: 434 PNSNPFAQKSSPFSSGFGTSAAPAFSSSAFGSSTSAAAPSLFGSSPSPFGANSSSTPGFG 493
Query: 331 ATTSAYLXXXXXXXXXXXXXXXXXXXQAQGETPSFSTGLNFSNTQSSPLFHSSIPSLGQT 510
+ S + AQ + F + F NTQSSPLF S+ P+ GQT
Sbjct: 494 QSPSLF-----------------NTAPAQATSSPFGNSI-FGNTQSSPLFSSAAPTGGQT 535
Query: 511 SFPVGQSAPAFGQ-STPAFGQ-------SNGFGGNLFXXXXXXXXXXXMGFNQT 648
GQ+ FGQ +TP+F Q S+G G++F GF QT
Sbjct: 536 GSAFGQNTSPFGQTTTPSFSQSSLFSSPSSGLVGSIFSSSAPLTSNNLTGFGQT 589
Score = 62.8 bits (151), Expect = 6e-08
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Frame = +1
Query: 217 STPGFGS-STPSLGASASNPFGSTPSPTPSVFCSTPGFGATTSAYLXXXXXXXXXXXXXX 393
STP FG+ STP+ GA++S FG+T +P STP FG+T SA+
Sbjct: 189 STPSFGATSTPAFGATSSPAFGATSAPAFGS-TSTPAFGSTGSAF-------GVSSTPVF 240
Query: 394 XXXXXQAQGETPSF-STGLNFSNTQSSPLFHSSIPSLGQTSFPV---GQSAPAFGQSTPA 561
P F S+ + T SSP +S P+ G +S P G + AFGQS+ A
Sbjct: 241 GSGGAFGASSNPMFGSSSTSAFGTSSSPFGATSTPAFGASSTPAFSFGSTPQAFGQSSSA 300
Query: 562 FGQSNGFG 585
FG S+ FG
Sbjct: 301 FGNSSPFG 308
>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
[Glycine max]
Length = 1038
Score = 111 bits (277), Expect = 1e-22
Identities = 81/234 (34%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Frame = +1
Query: 1 EKSHEELRWEDYQLGDKGGPIPAGQSSGGIGFNTSNTQXXXXXXXXXXXXXXXXXXXXXX 180
+KSHEELRWEDYQLGDKGG +P+ QS+G GF +S TQ
Sbjct: 380 DKSHEELRWEDYQLGDKGGSLPSTQSTGLTGFGSSTTQTNAFSPSPVFGQSSANPFSSTA 439
Query: 181 XXXXXXXXXXIFSTPGFGSSTP----------SLGASASNPFGSTPSPTPSVFCSTPGFG 330
+ GFG+S S A+A + FGS+PSP + STPGFG
Sbjct: 440 PNSNPFAQKSSPFSSGFGTSAAPAFSSSAFGSSTSAAAPSLFGSSPSPFGANSSSTPGFG 499
Query: 331 ATTSAYLXXXXXXXXXXXXXXXXXXXQAQGETPSFSTGLNFSNTQSSPLFHSSIPSLGQT 510
+ S + AQ + F + F NTQSSPLF S+ P+ GQT
Sbjct: 500 QSPSLF-----------------NTAPAQATSSPFGNSI-FGNTQSSPLFSSAAPTGGQT 541
Query: 511 SFPVGQSAPAFGQ-STPAFGQ-------SNGFGGNLFXXXXXXXXXXXMGFNQT 648
GQ+ FGQ +TP+F Q S+G G++F GF QT
Sbjct: 542 GSAFGQNTSPFGQTTTPSFSQSSLFSSPSSGLVGSIFSSSAPLTSNNLTGFGQT 595
Score = 62.8 bits (151), Expect = 6e-08
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Frame = +1
Query: 217 STPGFGS-STPSLGASASNPFGSTPSPTPSVFCSTPGFGATTSAYLXXXXXXXXXXXXXX 393
STP FG+ STP+ GA++S FG+T +P STP FG+T SA+
Sbjct: 189 STPSFGATSTPAFGATSSPAFGATSAPAFGS-TSTPAFGSTGSAF-------GVSSTPVF 240
Query: 394 XXXXXQAQGETPSF-STGLNFSNTQSSPLFHSSIPSLGQTSFPV---GQSAPAFGQSTPA 561
P F S+ + T SSP +S P+ G +S P G + AFGQS+ A
Sbjct: 241 GSGGAFGASSNPMFGSSSTSAFGTSSSPFGATSTPAFGASSTPAFSFGSTPQAFGQSSSA 300
Query: 562 FGQSNGFG 585
FG S+ FG
Sbjct: 301 FGNSSPFG 308