BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002300
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...    85   7e-15
ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like i...    75   6e-12
emb|CAD12248.1| DCL protein [Coffea arabica]                           74   9e-12
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...    74   9e-12
ref|XP_002302436.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 52/102 (50%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
 Frame = +2

Query: 152 SPPLRFHLSSTNPSVF--SFPYCYTTPSQQRS-SALKTTTSGGAGYSAADLLRKPRTEGK 322
           SPPL+ H   TNP     S P  +    +  S  ALKT + G       DLLRKP     
Sbjct: 8   SPPLQIHHLHTNPISLHPSHPILHFATHRTPSVPALKTASDGSQEVYGPDLLRKPHVSAP 67

Query: 323 DYDRGSSKGVEDDGGKTSWVDWEDQILEDTVPLVGFVRMILH 448
           D D G  K  +  GG+  WVDWEDQILEDTVPLVGFVRMILH
Sbjct: 68  D-DEGDRKRTKRKGGE--WVDWEDQILEDTVPLVGFVRMILH 106


>ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 215

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 54/113 (47%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
 Frame = +2

Query: 140 RNPLSPPLRFHLSSTNPSVFSFPYCYTTPSQQRSSALKTTTSGGAGYS----AADLLRKP 307
           RNP+S     HLS   PS+ SFP   TT  +    A K  + GG   S    A+D LRKP
Sbjct: 17  RNPIS----LHLS---PSLRSFPSRQTTSLRPVLCARKPRSPGGKLGSQDARASDFLRKP 69

Query: 308 RTEGKDYDRGSS------KGVEDDGGKTSWVDWEDQILEDTVPLVGFVRMILH 448
                D   GSS      KG E++     WVDWEDQILEDTVPLVG+VRMI+H
Sbjct: 70  TISPGDDGGGSSVREKSYKGREEE----EWVDWEDQILEDTVPLVGYVRMIIH 118


>emb|CAD12248.1| DCL protein [Coffea arabica]
          Length = 224

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
 Frame = +2

Query: 107 SCSSSHIYLNQRNPLSPPLRFHLSSTNPSVFSFPYCYTTPSQQRSSALKTTTSGGAGYSA 286
           S SSS    +     S  +  +L  + PS+    Y Y     +R +A++TT+S G G  +
Sbjct: 3   SISSSKFMNSSPFHNSNSISSNLLLSPPSLSFQLYPYNRSQLRRYAAVRTTSSEGRGSDS 62

Query: 287 --ADLLRKPRTEGKDYDRGSSKGVEDD-----GGKT--SWVDWEDQILEDTVPLVGFVRM 439
             A+LLRKP         G    VE+D     GG+   +WVDWEDQIL+DTVPLV FVRM
Sbjct: 63  FGAELLRKPVVSPAVVSEGEDSVVEEDDKYRSGGEEVEAWVDWEDQILQDTVPLVNFVRM 122

Query: 440 ILH 448
           ILH
Sbjct: 123 ILH 125


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 57/129 (44%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
 Frame = +2

Query: 95  MESISCSSSHIYLNQRNPLSPPLRFHLSSTNPSVFSFPYCYTTPSQQRSSALKTTTSGGA 274
           M SI  S+ H    + N  S P+  HL   +PS  SF  C       R +A+KT + GG 
Sbjct: 1   MASICTSNFHFLCRKNN--SSPISHHLL-LSPSSLSFSRCGGL-RLCRCAAVKTGSEGGG 56

Query: 275 GYSA-ADLLRKPRTEGKDYDRGSSKGV-----EDDGGKTS-----WVDWEDQILEDTVPL 421
             S  A+LLRKP    +      S+ +     +D+ GK S     WVDWEDQILEDTVPL
Sbjct: 57  IRSDNAELLRKPVISTELETTSESEELVKEESDDEVGKKSGDGEGWVDWEDQILEDTVPL 116

Query: 422 VGFVRMILH 448
           VGFVRMILH
Sbjct: 117 VGFVRMILH 125


>ref|XP_002302436.1| predicted protein [Populus trichocarpa] gi|222844162|gb|EEE81709.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
 Frame = +2

Query: 155 PPLRFHLSSTNPSVFS-------FPYCYTTPSQQRSSALKTTTSGGAGYSAADLLRKPRT 313
           PPL  H  S   S+FS       FP+  T  +   + A+KT      G  ++DLLRKP  
Sbjct: 13  PPLSLHALSNPISLFSSPAVVLSFPFNRTAFASPSARAIKT------GSDSSDLLRKPIA 66

Query: 314 EGK-------DYDRGSSKGVEDDGGKTSWVDWEDQILEDTVPLVGFVRMILH 448
             +       + +   S+G  D+  +  +VDWED+ILEDTVPLVGFVRMILH
Sbjct: 67  PSEKDLFGISEEEEEDSEGERDEEEEEGFVDWEDRILEDTVPLVGFVRMILH 118