BLASTX nr result

ID: Atractylodes22_contig00002274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002274
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101
ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thalia...   357   3e-96
ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arab...   356   5e-96
ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   355   1e-95
ref|NP_001131416.1| uncharacterized protein LOC100192745 [Zea ma...   328   1e-87

>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  372 bits (956), Expect = e-101
 Identities = 171/266 (64%), Positives = 215/266 (80%)
 Frame = +3

Query: 45  EIEEIGWEHLVKLAEDLSFVTFRVLDKKERVHVLEILLDKSYPNCPPSVSADVPYMFNLE 224
           +IEE+GWE LV+   DL F++FR+ DKK RVH++EI LDK+YP  PPSVSA+VPY+FN++
Sbjct: 1   QIEEVGWERLVRFGGDLEFLSFRITDKKGRVHIMEIQLDKTYPQKPPSVSAEVPYIFNVK 60

Query: 225 WSMNSRLMDVVKQFRQHLEKFQQFWSTVEDIDQSLWVSDSSQLHRATSFRHINIGNDCSI 404
           WS+ SRL D+V QFR+HLE+ Q+FWST+EDID SL V++  +L RAT+ R I+IGNDCSI
Sbjct: 61  WSVKSRLKDLVLQFREHLEELQEFWSTLEDIDHSLCVTNKKKLSRATTCRQIDIGNDCSI 120

Query: 405 ILFIHASEPRSLPECRFMGSDEKVNLLRDKWRRNCKRWRKDRLFTENLANLLEVHLPGPP 584
           +L I+A +PRSLPECRFMGS   VN +R  W RN KRW KD+   ENLA +LE  LP P 
Sbjct: 121 MLSINARDPRSLPECRFMGSGPVVNPVRKLWLRNNKRWMKDKTLPENLAFILETELPRPS 180

Query: 585 GGENNDQQIECGICYSQFLPIDDELGAKSGGRTDYMCENSTCSKAFHSVCLGDWLRSITT 764
               NDQQ+ECGICY+Q+LPID+ELG++SG  TD+ C+N++C +AFH+VCL DWLRSITT
Sbjct: 181 HVLENDQQVECGICYAQYLPIDEELGSRSGAGTDHTCDNTSCGRAFHTVCLVDWLRSITT 240

Query: 765 TRQSFDVLFGNCPYCSEPVAVKIGTR 842
           TRQSFDVLFGNCPYCSEPVAVK+  +
Sbjct: 241 TRQSFDVLFGNCPYCSEPVAVKLNDK 266


>ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thaliana]
           gi|222424329|dbj|BAH20121.1| AT5G65740 [Arabidopsis
           thaliana] gi|332010715|gb|AED98098.1| zinc ion binding
           protein [Arabidopsis thaliana]
          Length = 300

 Score =  357 bits (916), Expect = 3e-96
 Identities = 175/285 (61%), Positives = 215/285 (75%), Gaps = 5/285 (1%)
 Frame = +3

Query: 3   EVALSSSFSRAVYSEIEEIGWEHLVKLAEDLSFVTFRVLDKKERVHVLEILLDKSYPNCP 182
           E+A SSSF R VYSEIEEIGWE + +L  DL+F +F +LDKK R H LEI L++ YPN P
Sbjct: 16  ELAKSSSFYRKVYSEIEEIGWEPIRRLGGDLTFFSFHILDKKGRAHNLEIQLNRDYPNSP 75

Query: 183 PSVSADVPYMFNLEWSMNSRLMDVVKQFRQHLEKFQQFWSTVEDIDQSLWVSDSSQLHRA 362
           PSVSADVPYMF LEWS +SRL DV+ QF++HL+  Q+FWS +++ID+SL V D  Q  RA
Sbjct: 76  PSVSADVPYMFTLEWSTSSRLKDVMHQFQKHLDYLQEFWSVLDNIDKSLCVVDVKQPARA 135

Query: 363 TSFRHINIGNDCSIILFIHASEPRSLPECRFMG---SDEKVNLLRDKWRRNCKRWRKDRL 533
           ++ R I+ GNDC II+ I   +P+SLPE RF+G   S   +N L   WRRNCKRW  +R 
Sbjct: 136 SAIRRIDAGNDCIIIVHIDFKDPKSLPESRFIGPVPSATHMNNLHMLWRRNCKRWSNERS 195

Query: 534 FTENLANLLEVHLPGPPG--GENNDQQIECGICYSQFLPIDDELGAKSGGRTDYMCENST 707
           F ENL  +L   LP P G   E++ QQ+ECGICY+QFLP D+ELGA+SG RTDY CEN +
Sbjct: 196 FPENLECILGTELPKPLGLQVEDDQQQVECGICYAQFLPTDEELGARSGTRTDYTCENIS 255

Query: 708 CSKAFHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKIGTR 842
           C+K+FHS+CL DWLRSITTTRQSFDVLFGNCPYCS+PVAVK   +
Sbjct: 256 CNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKTSNK 300


>ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arabidopsis lyrata subsp.
           lyrata] gi|297312523|gb|EFH42947.1| hypothetical protein
           ARALYDRAFT_496810 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  356 bits (914), Expect = 5e-96
 Identities = 172/282 (60%), Positives = 214/282 (75%), Gaps = 5/282 (1%)
 Frame = +3

Query: 3   EVALSSSFSRAVYSEIEEIGWEHLVKLAEDLSFVTFRVLDKKERVHVLEILLDKSYPNCP 182
           E+A SSSF R VYSEIEEIGWE L +L  DL+F +F++ DKK R H LE  L++ YPN P
Sbjct: 16  ELAKSSSFYRKVYSEIEEIGWEPLRRLGGDLTFFSFQIFDKKGRAHNLEFQLNRDYPNSP 75

Query: 183 PSVSADVPYMFNLEWSMNSRLMDVVKQFRQHLEKFQQFWSTVEDIDQSLWVSDSSQLHRA 362
           PSVSADVPYMF LEWS +SRL D++ QF++HL+  Q+FWS ++DID+SL + D+ Q  RA
Sbjct: 76  PSVSADVPYMFTLEWSTSSRLKDLMYQFQKHLDYLQEFWSVLDDIDKSLCIVDAKQPSRA 135

Query: 363 TSFRHINIGNDCSIILFIHASEPRSLPECRFMG---SDEKVNLLRDKWRRNCKRWRKDRL 533
           ++ R I+ GNDC +I+ I   +P+SLPECRF+G       +N L   WRRN K+W K+R 
Sbjct: 136 SAIRRIHAGNDCILIVHIDFKDPKSLPECRFIGPVPPATHMNSLHMLWRRNSKKWSKERP 195

Query: 534 FTENLANLLEVHLPGPPG--GENNDQQIECGICYSQFLPIDDELGAKSGGRTDYMCENST 707
           F ENL  +L   LP P G   E N QQ+ECGICY+QFLP D+ELGA+SG +TDY CEN +
Sbjct: 196 FPENLECILGTELPKPLGLQEEENQQQVECGICYAQFLPTDEELGARSGTQTDYTCENIS 255

Query: 708 CSKAFHSVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKI 833
           C+K+FHS+CL DWLRSITTTRQSFDVLFGNCPYCS+PVAVKI
Sbjct: 256 CNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYCSDPVAVKI 297


>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  355 bits (910), Expect = 1e-95
 Identities = 161/247 (65%), Positives = 200/247 (80%)
 Frame = +3

Query: 93  LSFVTFRVLDKKERVHVLEILLDKSYPNCPPSVSADVPYMFNLEWSMNSRLMDVVKQFRQ 272
           L+FV     DKK RVH+LE+ LD+++P  PPSVSADVPY+F++ WSMNSRL D+++QF +
Sbjct: 10  LTFVYLSSRDKKGRVHILEVQLDETHPRHPPSVSADVPYIFSVRWSMNSRLKDLMQQFHE 69

Query: 273 HLEKFQQFWSTVEDIDQSLWVSDSSQLHRATSFRHINIGNDCSIILFIHASEPRSLPECR 452
           HLEK Q+FWST+EDID SL V D  +   A SFR I+IGNDC I+LFI+  +PRSLPECR
Sbjct: 70  HLEKLQEFWSTLEDIDNSLCVVDIHKSSHAISFRQIDIGNDCFIMLFINTKDPRSLPECR 129

Query: 453 FMGSDEKVNLLRDKWRRNCKRWRKDRLFTENLANLLEVHLPGPPGGENNDQQIECGICYS 632
           F+GS    + LR +W+RNCK+W +D+ F ENL ++LE  LP PP  + NDQQIECGICY+
Sbjct: 130 FLGSGPVAHSLRKRWQRNCKQWMQDKTFLENLLSILETELPKPPDVQKNDQQIECGICYA 189

Query: 633 QFLPIDDELGAKSGGRTDYMCENSTCSKAFHSVCLGDWLRSITTTRQSFDVLFGNCPYCS 812
           Q+LPIDDELG +SG  TDY C+NS C++AFHS+CLGDWLRSITTTRQS++VLFGNCPYCS
Sbjct: 190 QYLPIDDELGPRSGTGTDYTCDNSNCNRAFHSICLGDWLRSITTTRQSYNVLFGNCPYCS 249

Query: 813 EPVAVKI 833
           EPVAVKI
Sbjct: 250 EPVAVKI 256


>ref|NP_001131416.1| uncharacterized protein LOC100192745 [Zea mays]
           gi|194691460|gb|ACF79814.1| unknown [Zea mays]
           gi|413933185|gb|AFW67736.1| ubiquitin ligase protein
           FANCL [Zea mays]
          Length = 322

 Score =  328 bits (841), Expect = 1e-87
 Identities = 155/276 (56%), Positives = 206/276 (74%), Gaps = 4/276 (1%)
 Frame = +3

Query: 18  SSFSRAVYSEIEEIGWEHLVKLAED-LSFVTFRVLDKKERVHVLEILLDKSYPNCPPSVS 194
           ++F  +V+++IEEIGW+ LV    D +S +TFRV+D+  R+H+LEI L   YP  PPS+S
Sbjct: 44  AAFYSSVFAQIEEIGWKQLVSATGDGVSCLTFRVVDEPGRMHLLEITLPMGYPESPPSIS 103

Query: 195 ADVPYMFNLEWSMNSRLMDVVKQFRQHLEKFQQFWSTVEDIDQSLWVSDSSQLHRATSFR 374
           ADVPY+  + WS NSRL DV+ QF+ HL+  Q+FW+T+++ID+ LW+ D ++   A S R
Sbjct: 104 ADVPYLPKIHWSKNSRLKDVICQFQAHLKILQEFWNTMDEIDKVLWIVDPTKPSYAMSHR 163

Query: 375 HINIGNDCSIILFIHASEPRSLPECRFMGSDEKVNLLRDKWRRNCKRWRKDRLFTENLAN 554
            I +G+DC I+L + A +P SLPECRF+G+D K++ L   WR+N K+W   + F ENLA 
Sbjct: 164 RIALGDDCYILLQVDARKPNSLPECRFLGTDGKLDQLIINWRKNRKKWDTKKKFHENLAA 223

Query: 555 LLEVHLPGPPG---GENNDQQIECGICYSQFLPIDDELGAKSGGRTDYMCENSTCSKAFH 725
           +L+  LP PP       +D+Q +CGICY++ LP+DDELGA SG  TDYMCEN +CS+AFH
Sbjct: 224 VLDFALPSPPSVGDKAKDDEQADCGICYAKHLPVDDELGAHSGCATDYMCENPSCSRAFH 283

Query: 726 SVCLGDWLRSITTTRQSFDVLFGNCPYCSEPVAVKI 833
           SVCL DWLRSITTTRQSFDVLFGNCPYCS+PVAVKI
Sbjct: 284 SVCLRDWLRSITTTRQSFDVLFGNCPYCSDPVAVKI 319


Top