BLASTX nr result

ID: Atractylodes22_contig00002242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002242
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expr...    65   1e-08
sp|Q43157.1|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimera...    65   1e-08
ref|XP_004137418.1| PREDICTED: ribulose-phosphate 3-epimerase, c...    64   1e-08
sp|Q43843.1|RPE_SOLTU RecName: Full=Ribulose-phosphate 3-epimera...    63   3e-08
ref|XP_003524706.1| PREDICTED: ribulose-phosphate 3-epimerase, c...    61   1e-07

>gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expression vector
           pFL505]
          Length = 285

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 127 KPSLSQPNSLTCTRRPMRTVVKASSRVDRFSKSDIIVSPSIL 2
           +PS S PNSLT TRR ++T+VKA+SRVD+FSKSDIIVSPSIL
Sbjct: 28  QPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSIL 69


>sp|Q43157.1|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
           AltName: Full=Pentose-5-phosphate 3-epimerase;
           Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
           Precursor gi|1162980|gb|AAC41677.1| ribulose-5-phosphate
           3-epimerase [Spinacia oleracea]
           gi|3264788|gb|AAC24708.1| ribulose-phosphate 3-epimerase
           [Spinacia oleracea] gi|1587969|prf||2207382A
           D-ribulose-5-phosphate 3-epimerase
          Length = 285

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 127 KPSLSQPNSLTCTRRPMRTVVKASSRVDRFSKSDIIVSPSIL 2
           +PS S PNSLT TRR ++T+VKA+SRVD+FSKSDIIVSPSIL
Sbjct: 28  QPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSIL 69


>ref|XP_004137418.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like
           [Cucumis sativus] gi|449486996|ref|XP_004157465.1|
           PREDICTED: ribulose-phosphate 3-epimerase,
           chloroplastic-like [Cucumis sativus]
          Length = 283

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -1

Query: 133 FAKPSLSQPNSLTCTRRPMRTVVKASSRVDRFSKSDIIVSPSIL 2
           F KP  SQP+SLT +RR  R VVKAS+RVD+FSKSDIIVSPSIL
Sbjct: 24  FQKPPNSQPSSLTVSRRRFRNVVKASARVDKFSKSDIIVSPSIL 67


>sp|Q43843.1|RPE_SOLTU RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
           AltName: Full=Pentose-5-phosphate 3-epimerase;
           Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
           Precursor gi|902739|emb|CAA90426.1|
           pentose-5-phosphate-3-epimerase [Solanum tuberosum]
          Length = 280

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 42/83 (50%), Positives = 46/83 (55%)
 Frame = -1

Query: 250 SLGSSALVQSQXXXXXXXXXXXXXXXXXXXXXXXXXXNGFAKPSLSQPNSLTCTRRPMRT 71
           SLGSS L+QSQ                              K S S PNSLT TRR ++T
Sbjct: 1   SLGSSTLLQSQISGFGGSQK-------------------LQKISFSNPNSLTFTRRRIQT 41

Query: 70  VVKASSRVDRFSKSDIIVSPSIL 2
           VV ASSRVD+FSKSDIIVSPSIL
Sbjct: 42  VVNASSRVDKFSKSDIIVSPSIL 64


>ref|XP_003524706.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like
           [Glycine max]
          Length = 280

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
 Frame = -1

Query: 139 NGFA--KPSLSQPNSLTCTRRPMRTVVKASSRVDRFSKSDIIVSPSIL 2
           NGF   K SLS P SLT +R+ + T VKA+SRVD+FSKSDIIVSPSIL
Sbjct: 17  NGFCLHKTSLSHPRSLTFSRKKISTTVKATSRVDKFSKSDIIVSPSIL 64


Top