BLASTX nr result

ID: Atractylodes22_contig00001438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001438
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190330.1| structural maintenance of chromosomes protein 2...    80   5e-30
ref|XP_002510963.1| Structural maintenance of chromosome, putati...    79   2e-29
ref|XP_002326795.1| condensin complex components subunit [Populu...    77   3e-28
ref|XP_002269854.1| PREDICTED: structural maintenance of chromos...    75   4e-28
ref|XP_002304405.1| condensin complex components subunit [Populu...    77   1e-27

>ref|NP_190330.1| structural maintenance of chromosomes protein 2-2 [Arabidopsis
           thaliana] gi|75337454|sp|Q9SN90.1|SMC22_ARATH RecName:
           Full=Structural maintenance of chromosomes protein 2-2;
           Short=AtSMC2-2; AltName: Full=Chromosome-associated
           protein E-2; Short=AtCAP-E2 gi|6522529|emb|CAB61972.1|
           chromosome assembly protein homolog [Arabidopsis
           thaliana] gi|332644763|gb|AEE78284.1| structural
           maintenance of chromosomes protein 2-2 [Arabidopsis
           thaliana]
          Length = 1171

 Score = 80.5 bits (197), Expect(2) = 5e-30
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = +1

Query: 283 KIEGATQMFVGVASQNNVRHIAQEVCEGEKLFYVVVDTETTRKQLLQIGDLRRRVTITPL 462
           K++G     + V  ++++   A EV  G KLF V+VDTE T KQLLQ GDLRRRVTI PL
Sbjct: 519 KVKGVVAKLIKVNDRSSMT--ALEVTAGGKLFNVIVDTEDTGKQLLQKGDLRRRVTIIPL 576

Query: 463 NKIQSHHVPPRVQK 504
           NKIQSH VPPRVQ+
Sbjct: 577 NKIQSHLVPPRVQQ 590



 Score = 76.6 bits (187), Expect(2) = 5e-30
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +2

Query: 518 SAMEYVFGLTFVCKTRDVVREVAYNRQVSTPSVML*GDTFQPRGLLSGGS 667
           +AMEYVFG TFVCKT D  +EVA+NR++ TPSV L GD FQP GLL+GGS
Sbjct: 613 NAMEYVFGSTFVCKTTDAAKEVAFNREIRTPSVTLEGDVFQPSGLLTGGS 662


>ref|XP_002510963.1| Structural maintenance of chromosome, putative [Ricinus communis]
           gi|223550078|gb|EEF51565.1| Structural maintenance of
           chromosome, putative [Ricinus communis]
          Length = 1176

 Score = 79.0 bits (193), Expect(2) = 2e-29
 Identities = 44/74 (59%), Positives = 49/74 (66%)
 Frame = +1

Query: 283 KIEGATQMFVGVASQNNVRHIAQEVCEGEKLFYVVVDTETTRKQLLQIGDLRRRVTITPL 462
           K++G     + V   +     A EV  G KLF VVVDTE T KQLLQ GDLRRRVTI PL
Sbjct: 519 KVKGVVAKLIKVKDSSTAT--ALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPL 576

Query: 463 NKIQSHHVPPRVQK 504
           NKIQ H VPPRVQ+
Sbjct: 577 NKIQPHTVPPRVQQ 590



 Score = 76.3 bits (186), Expect(2) = 2e-29
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +2

Query: 518 SAMEYVFGLTFVCKTRDVVREVAYNRQVSTPSVML*GDTFQPRGLLSGGS 667
           SAMEYVFG TFVCKT D  +E+A+NR++ TPSV L GD FQP GLL+GGS
Sbjct: 616 SAMEYVFGSTFVCKTIDAAKEIAFNREIRTPSVTLEGDIFQPSGLLTGGS 665


>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
           gi|222834117|gb|EEE72594.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1176

 Score = 77.4 bits (189), Expect(2) = 3e-28
 Identities = 42/74 (56%), Positives = 52/74 (70%)
 Frame = +1

Query: 283 KIEGATQMFVGVASQNNVRHIAQEVCEGEKLFYVVVDTETTRKQLLQIGDLRRRVTITPL 462
           K++G     + V  ++ +   A EV  G KL+ VVVDTE+T KQLLQ GDLRRRVTI PL
Sbjct: 519 KVKGVVAKLIKVKDRSTMT--ALEVTAGGKLYNVVVDTESTGKQLLQNGDLRRRVTIVPL 576

Query: 463 NKIQSHHVPPRVQK 504
           NKIQSH V PR+Q+
Sbjct: 577 NKIQSHTVHPRIQQ 590



 Score = 73.9 bits (180), Expect(2) = 3e-28
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = +2

Query: 518 SAMEYVFGLTFVCKTRDVVREVAYNRQVSTPSVML*GDTFQPRGLLSGGS 667
           +AMEYVFG TF+CKT D  +EVA++R++ TPSV L GD FQP GLL+GGS
Sbjct: 616 TAMEYVFGSTFICKTMDAAKEVAFSREIRTPSVTLEGDIFQPSGLLTGGS 665


>ref|XP_002269854.1| PREDICTED: structural maintenance of chromosomes protein 2-1 [Vitis
           vinifera]
          Length = 1176

 Score = 75.5 bits (184), Expect(2) = 4e-28
 Identities = 43/74 (58%), Positives = 49/74 (66%)
 Frame = +1

Query: 283 KIEGATQMFVGVASQNNVRHIAQEVCEGEKLFYVVVDTETTRKQLLQIGDLRRRVTITPL 462
           +++G     + V   + +   A EV  G KLF VVVDTE T K LLQ GDLRRRVTI PL
Sbjct: 519 RVKGVVAKLIKVKDSSTMT--ALEVAAGGKLFNVVVDTENTGKLLLQNGDLRRRVTIIPL 576

Query: 463 NKIQSHHVPPRVQK 504
           NKIQSH VP RVQK
Sbjct: 577 NKIQSHTVPLRVQK 590



 Score = 75.5 bits (184), Expect(2) = 4e-28
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = +2

Query: 518 SAMEYVFGLTFVCKTRDVVREVAYNRQVSTPSVML*GDTFQPRGLLSGGS 667
           SAMEYVFG TFVCK  D  +EVA+NR +STPSV L GD FQP GLL+GGS
Sbjct: 616 SAMEYVFGSTFVCKRIDAAKEVAFNRDISTPSVTLDGDIFQPSGLLTGGS 665


>ref|XP_002304405.1| condensin complex components subunit [Populus trichocarpa]
           gi|222841837|gb|EEE79384.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1176

 Score = 77.4 bits (189), Expect(2) = 1e-27
 Identities = 44/74 (59%), Positives = 51/74 (68%)
 Frame = +1

Query: 283 KIEGATQMFVGVASQNNVRHIAQEVCEGEKLFYVVVDTETTRKQLLQIGDLRRRVTITPL 462
           K++G     + V   + +   A EV  G KLF VVVDTE+T KQLLQ GDLRRRVTI PL
Sbjct: 519 KVKGVVAKLIKVNDSSTMT--ALEVTAGGKLFNVVVDTESTGKQLLQNGDLRRRVTIIPL 576

Query: 463 NKIQSHHVPPRVQK 504
           NKIQSH VP RVQ+
Sbjct: 577 NKIQSHTVPIRVQQ 590



 Score = 71.6 bits (174), Expect(2) = 1e-27
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +2

Query: 518 SAMEYVFGLTFVCKTRDVVREVAYNRQVSTPSVML*GDTFQPRGLLSGGS 667
           +AMEYVFG TFVCK  D  +EVA++R++ TPSV L GD FQP GLL+GGS
Sbjct: 616 TAMEYVFGSTFVCKNIDAAKEVAFSREIRTPSVTLEGDIFQPSGLLTGGS 665


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