BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001400
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata...   236   1e-60
ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thalian...   235   3e-60
ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-59
ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   229   1e-58
ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata...   229   2e-58

>ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 250

 Score =  236 bits (602), Expect = 1e-60
 Identities = 119/129 (92%), Positives = 120/129 (93%)
 Frame = +3

Query: 3   RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFK 182
           RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRA RAKSMKF 
Sbjct: 94  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFM 153

Query: 183 DGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMP 362
           DGYMVSSGQP KEYIDSAVRHVLLRQGVLGIKVKIML WDPTGK GPKTPLPD VIIH P
Sbjct: 154 DGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAP 213

Query: 363 KDDVVALPP 389
           KDDVV L P
Sbjct: 214 KDDVVNLAP 222


>ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
           gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S
           ribosomal protein S3-1
           gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13
           [Arabidopsis thaliana] gi|4582468|gb|AAD24852.1| 40S
           ribosomal protein; contains C-terminal domain
           [Arabidopsis thaliana] gi|15028253|gb|AAK76715.1|
           putative 40S ribosomal protein; contains C-terminal
           domain [Arabidopsis thaliana] gi|15450571|gb|AAK96463.1|
           At2g31610/T9H9.13 [Arabidopsis thaliana]
           gi|15451084|gb|AAK96813.1| 40S ribosomal protein
           [Arabidopsis thaliana] gi|20148377|gb|AAM10079.1| 40S
           ribosomal protein; contains C-terminal domain
           [Arabidopsis thaliana] gi|20258907|gb|AAM14147.1|
           putative 40S ribosomal protein [Arabidopsis thaliana]
           gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1
           [Arabidopsis thaliana]
          Length = 250

 Score =  235 bits (599), Expect = 3e-60
 Identities = 118/129 (91%), Positives = 120/129 (93%)
 Frame = +3

Query: 3   RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFK 182
           RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRA RAKSMKFK
Sbjct: 94  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFK 153

Query: 183 DGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMP 362
           DGYMVSSGQP KEYID+AVRHVLLRQGVLGIKVKIML WDPTGK GPKTPLPD VIIH P
Sbjct: 154 DGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAP 213

Query: 363 KDDVVALPP 389
           KDDVV   P
Sbjct: 214 KDDVVYSAP 222


>ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  230 bits (587), Expect = 8e-59
 Identities = 114/129 (88%), Positives = 120/129 (93%)
 Frame = +3

Query: 3   RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFK 182
           RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRAQRAKSMKFK
Sbjct: 94  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFK 153

Query: 183 DGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMP 362
           DGYM+SSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML WDP GK+GP TPLPD V IH P
Sbjct: 154 DGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPP 213

Query: 363 KDDVVALPP 389
           K++   +PP
Sbjct: 214 KEEEEYVPP 222


>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297743020|emb|CBI35887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  229 bits (585), Expect = 1e-58
 Identities = 115/129 (89%), Positives = 119/129 (92%)
 Frame = +3

Query: 3   RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFK 182
           RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRAQRAKSMKFK
Sbjct: 94  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFK 153

Query: 183 DGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMP 362
           DGYM+SSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML WDP GK GPKTPLPD V IH P
Sbjct: 154 DGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTP 213

Query: 363 KDDVVALPP 389
           K++   L P
Sbjct: 214 KEEEEYLRP 222


>ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
           gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  229 bits (584), Expect = 2e-58
 Identities = 114/129 (88%), Positives = 119/129 (92%)
 Frame = +3

Query: 3   RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFK 182
           RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRA RAKSMKFK
Sbjct: 94  RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFK 153

Query: 183 DGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMP 362
           DGYMVSSGQP KEYID+AVRHVLLRQGVLG+KVKIML WDP GKLGP TPLPD VIIH P
Sbjct: 154 DGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLKVKIMLDWDPKGKLGPMTPLPDVVIIHTP 213

Query: 363 KDDVVALPP 389
           K+D V + P
Sbjct: 214 KEDDVYIAP 222