BLASTX nr result

ID: Atractylodes22_contig00001378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001378
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608535.1| Histone H3 [Medicago truncatula] gi|35550959...   204   1e-62
tpg|DAA45649.1| TPA: histone H3 [Zea mays]                            204   4e-62
ref|NP_001078516.1| histone H3 [Arabidopsis thaliana] gi|3326617...   204   4e-62
gb|AFW86016.1| histone H3 [Zea mays]                                  204   5e-62
gb|AFW86017.1| histone H3 [Zea mays]                                  204   5e-62

>ref|XP_003608535.1| Histone H3 [Medicago truncatula] gi|355509590|gb|AES90732.1|
           Histone H3 [Medicago truncatula]
          Length = 391

 Score =  204 bits (518), Expect(2) = 1e-62
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +2

Query: 209 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 388
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 289 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 348

Query: 389 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 517
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 349 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 391



 Score = 62.0 bits (149), Expect(2) = 1e-62
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +3

Query: 36  RRYRFTMARTKQTARKSTGGKAPRKQLATKAARKSA 143
           R++   MARTKQTARKSTGGKAPRKQLATKAARKSA
Sbjct: 250 RKFPEVMARTKQTARKSTGGKAPRKQLATKAARKSA 285



 Score =  202 bits (514), Expect(2) = 7e-61
 Identities = 102/102 (100%), Positives = 102/102 (100%)
 Frame = +2

Query: 209 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 388
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 75  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 134

Query: 389 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 514
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Sbjct: 135 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 176



 Score = 57.8 bits (138), Expect(2) = 7e-61
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 54  MARTKQTARKSTGGKAPRKQLATKAARKSA 143
           MARTKQTARKSTGGKAPRK LATKAARKSA
Sbjct: 42  MARTKQTARKSTGGKAPRKPLATKAARKSA 71


>tpg|DAA45649.1| TPA: histone H3 [Zea mays]
          Length = 165

 Score =  204 bits (518), Expect(2) = 4e-62
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +2

Query: 209 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 388
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 63  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 122

Query: 389 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 517
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 123 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 165



 Score = 60.5 bits (145), Expect(2) = 4e-62
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +3

Query: 51  TMARTKQTARKSTGGKAPRKQLATKAARKSA 143
           +MARTKQTARKSTGGKAPRKQLATKAARKSA
Sbjct: 29  SMARTKQTARKSTGGKAPRKQLATKAARKSA 59


>ref|NP_001078516.1| histone H3 [Arabidopsis thaliana] gi|332661756|gb|AEE87156.1|
           histone H3 [Arabidopsis thaliana]
          Length = 164

 Score =  204 bits (518), Expect(2) = 4e-62
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +2

Query: 209 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 388
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 62  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 121

Query: 389 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 517
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 122 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 164



 Score = 60.5 bits (145), Expect(2) = 4e-62
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 45  RFTMARTKQTARKSTGGKAPRKQLATKAARKSA 143
           +  MARTKQTARKSTGGKAPRKQLATKAARKSA
Sbjct: 26  KIKMARTKQTARKSTGGKAPRKQLATKAARKSA 58


>gb|AFW86016.1| histone H3 [Zea mays]
          Length = 247

 Score =  204 bits (518), Expect(2) = 5e-62
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +2

Query: 209 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 388
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 145 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 204

Query: 389 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 517
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 205 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 247



 Score = 60.1 bits (144), Expect(2) = 5e-62
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +3

Query: 54  MARTKQTARKSTGGKAPRKQLATKAARKSA 143
           MARTKQTARKSTGGKAPRKQLATKAARKSA
Sbjct: 112 MARTKQTARKSTGGKAPRKQLATKAARKSA 141


>gb|AFW86017.1| histone H3 [Zea mays]
          Length = 227

 Score =  204 bits (518), Expect(2) = 5e-62
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = +2

Query: 209 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 388
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 125 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 184

Query: 389 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 517
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 185 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 227



 Score = 60.1 bits (144), Expect(2) = 5e-62
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +3

Query: 54  MARTKQTARKSTGGKAPRKQLATKAARKSA 143
           MARTKQTARKSTGGKAPRKQLATKAARKSA
Sbjct: 92  MARTKQTARKSTGGKAPRKQLATKAARKSA 121


Top