BLASTX nr result

ID: Atractylodes22_contig00001262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001262
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   194   8e-48
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   194   1e-47
ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]...   191   9e-47
ref|NP_193312.5| RNA binding protein [Arabidopsis thaliana] gi|4...   191   1e-46
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   189   4e-46

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  194 bits (494), Expect = 8e-48
 Identities = 95/127 (74%), Positives = 107/127 (84%)
 Frame = +1

Query: 1   KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180
           KRATNI R  LV+LGT IGKFTK GKFHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360
           V+KGGLGRIT+NI A DG+VVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 361 LRNQEDL 381
           LR +++L
Sbjct: 181 LRMEDEL 187


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  194 bits (492), Expect = 1e-47
 Identities = 95/127 (74%), Positives = 107/127 (84%)
 Frame = +1

Query: 1   KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180
           KRATNI R  LV+LGT IGKFTK GKFHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360
           V+KGGLGRIT+NI A DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 361 LRNQEDL 381
           LR +++L
Sbjct: 181 LRMEDEL 187


>ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]
           gi|297316046|gb|EFH46469.1| At4g15770 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 187

 Score =  191 bits (485), Expect = 9e-47
 Identities = 93/127 (73%), Positives = 106/127 (83%)
 Frame = +1

Query: 1   KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180
           KRATNI R+NLV+ GT IGK+T +G FHLTI          KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120

Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360
           V+KGGLGRITD+I   DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 361 LRNQEDL 381
           LR+++DL
Sbjct: 181 LRDEDDL 187


>ref|NP_193312.5| RNA binding protein [Arabidopsis thaliana]
           gi|45752644|gb|AAS76220.1| At4g15770 [Arabidopsis
           thaliana] gi|332658250|gb|AEE83650.1| RNA binding
           protein [Arabidopsis thaliana]
          Length = 187

 Score =  191 bits (484), Expect = 1e-46
 Identities = 93/127 (73%), Positives = 105/127 (82%)
 Frame = +1

Query: 1   KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180
           KRATNI R+NLV+ GT IGK+T +G FHLTI          KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120

Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360
           V+KGGLGRITD+I   DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY
Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 361 LRNQEDL 381
           LR ++DL
Sbjct: 181 LRGEDDL 187


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  189 bits (480), Expect = 4e-46
 Identities = 91/127 (71%), Positives = 105/127 (82%)
 Frame = +1

Query: 1   KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180
           KRATN+ R NLV+LGT IGKFT  G FHLT+Q         KHKVWLKPTSEMSFLYGN 
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360
           V+KGGLGRIT+NI   DGVVV+SMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 361 LRNQEDL 381
           LR +++L
Sbjct: 181 LRMEDEL 187


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