BLASTX nr result
ID: Atractylodes22_contig00001262
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00001262 (626 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p... 194 8e-48 ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p... 194 1e-47 ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata]... 191 9e-47 ref|NP_193312.5| RNA binding protein [Arabidopsis thaliana] gi|4... 191 1e-46 ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p... 189 4e-46 >ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Vitis vinifera] gi|147783622|emb|CAN68143.1| hypothetical protein VITISV_035660 [Vitis vinifera] Length = 187 Score = 194 bits (494), Expect = 8e-48 Identities = 95/127 (74%), Positives = 107/127 (84%) Frame = +1 Query: 1 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180 KRATNI R LV+LGT IGKFTK GKFHLT+Q KHKVWLKPTSEMSFLYGN Sbjct: 61 KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120 Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360 V+KGGLGRIT+NI A DG+VVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY Sbjct: 121 VLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180 Query: 361 LRNQEDL 381 LR +++L Sbjct: 181 LRMEDEL 187 >ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Vitis vinifera] Length = 187 Score = 194 bits (492), Expect = 1e-47 Identities = 95/127 (74%), Positives = 107/127 (84%) Frame = +1 Query: 1 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180 KRATNI R LV+LGT IGKFTK GKFHLT+Q KHKVWLKPTSEMSFLYGN Sbjct: 61 KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120 Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360 V+KGGLGRIT+NI A DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY Sbjct: 121 VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180 Query: 361 LRNQEDL 381 LR +++L Sbjct: 181 LRMEDEL 187 >ref|XP_002870210.1| At4g15770 [Arabidopsis lyrata subsp. lyrata] gi|297316046|gb|EFH46469.1| At4g15770 [Arabidopsis lyrata subsp. lyrata] Length = 187 Score = 191 bits (485), Expect = 9e-47 Identities = 93/127 (73%), Positives = 106/127 (83%) Frame = +1 Query: 1 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180 KRATNI R+NLV+ GT IGK+T +G FHLTI KHKVWLKPTSEMSFLYGN Sbjct: 61 KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120 Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360 V+KGGLGRITD+I DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180 Query: 361 LRNQEDL 381 LR+++DL Sbjct: 181 LRDEDDL 187 >ref|NP_193312.5| RNA binding protein [Arabidopsis thaliana] gi|45752644|gb|AAS76220.1| At4g15770 [Arabidopsis thaliana] gi|332658250|gb|AEE83650.1| RNA binding protein [Arabidopsis thaliana] Length = 187 Score = 191 bits (484), Expect = 1e-46 Identities = 93/127 (73%), Positives = 105/127 (82%) Frame = +1 Query: 1 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180 KRATNI R+NLV+ GT IGK+T +G FHLTI KHKVWLKPTSEMSFLYGN Sbjct: 61 KRATNISRKNLVSFGTCIGKYTHAGSFHLTIMSLNILAANAKHKVWLKPTSEMSFLYGNH 120 Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360 V+KGGLGRITD+I DGVVVFSMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ QAD GEY Sbjct: 121 VLKGGLGRITDSIVPGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180 Query: 361 LRNQEDL 381 LR ++DL Sbjct: 181 LRGEDDL 187 >ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Cucumis sativus] Length = 187 Score = 189 bits (480), Expect = 4e-46 Identities = 91/127 (71%), Positives = 105/127 (82%) Frame = +1 Query: 1 KRATNIKRENLVALGTNIGKFTKSGKFHLTIQXXXXXXXXXKHKVWLKPTSEMSFLYGND 180 KRATN+ R NLV+LGT IGKFT G FHLT+Q KHKVWLKPTSEMSFLYGN Sbjct: 61 KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120 Query: 181 VVKGGLGRITDNINAYDGVVVFSMSDLPLGFGIAAKSTQDCRKMDPNGLVVIRQADTGEY 360 V+KGGLGRIT+NI DGVVV+SMSD+PLGFGIAAKSTQDCRK+DPNG+VV+ Q+D GEY Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180 Query: 361 LRNQEDL 381 LR +++L Sbjct: 181 LRMEDEL 187