BLASTX nr result

ID: Atractylodes22_contig00001243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001243
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_733976.1| movement protein [Satsuma dwarf virus]                88   8e-16
ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]              88   8e-16
ref|NP_620567.1| polyprotein [Satsuma dwarf virus] gi|81979374|s...    88   8e-16
ref|NP_620566.1| polyprotein [Satsuma dwarf virus] gi|81979373|s...    88   8e-16
gb|ADE87962.1| polyprotein [Satsuma dwarf virus]                       86   2e-15

>ref|NP_733976.1| movement protein [Satsuma dwarf virus]
          Length = 913

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = -1

Query: 392 METYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 273
           ME YGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG
Sbjct: 1   MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 40



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -1

Query: 170 RAFEXXXXXXXXXXXALSAEGITDRSYKGRTYQVSTRGLSWKSVR 36
           RAF            AL AEG+ DRSYKGRTY+VS RGLSWKSVR
Sbjct: 97  RAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSVRGLSWKSVR 141


>ref|NP_734023.1| NTP-binding domain [Satsuma dwarf virus]
          Length = 1190

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = -1

Query: 392 METYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 273
           ME YGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG
Sbjct: 1   MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 40



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 31/45 (68%)
 Frame = -1

Query: 170 RAFEXXXXXXXXXXXALSAEGITDRSYKGRTYQVSTRGLSWKSVR 36
           RAF            AL AEG+ DRSYKGRTY+VSTRGLSWKSVR
Sbjct: 97  RAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSTRGLSWKSVR 141


>ref|NP_620567.1| polyprotein [Satsuma dwarf virus]
           gi|81979374|sp|Q9WAL9.1|POL2_SDVS5 RecName: Full=RNA2
           polyprotein; AltName: Full=P2; Contains: RecName:
           Full=Movement protein; Short=MP; Contains: RecName:
           Full=Large capsid protein; Short=LCP; Contains: RecName:
           Full=Small capsid protein; Short=SCP
           gi|4589402|dbj|BAA76747.1| polyprotein [Satsuma dwarf
           virus]
          Length = 1574

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = -1

Query: 392 METYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 273
           ME YGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG
Sbjct: 1   MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 40



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -1

Query: 170 RAFEXXXXXXXXXXXALSAEGITDRSYKGRTYQVSTRGLSWKSVR 36
           RAF            AL AEG+ DRSYKGRTY+VS RGLSWKSVR
Sbjct: 97  RAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSVRGLSWKSVR 141


>ref|NP_620566.1| polyprotein [Satsuma dwarf virus]
           gi|81979373|sp|Q9WAL8.1|POL1_SDVS5 RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=Putative helicase; AltName: Full=Putative
           NTP-binding protein; Contains: RecName: Full=Probable
           picornain 3C-like protease; Short=3C-like protease;
           Contains: RecName: Full=Probable RNA-directed RNA
           polymerase gi|4589400|dbj|BAA76746.1| polyprotein
           [Satsuma dwarf virus]
          Length = 2081

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/40 (97%), Positives = 39/40 (97%)
 Frame = -1

Query: 392 METYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 273
           ME YGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG
Sbjct: 1   MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 40



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 31/45 (68%)
 Frame = -1

Query: 170 RAFEXXXXXXXXXXXALSAEGITDRSYKGRTYQVSTRGLSWKSVR 36
           RAF            AL AEG+ DRSYKGRTY+VSTRGLSWKSVR
Sbjct: 97  RAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSTRGLSWKSVR 141


>gb|ADE87962.1| polyprotein [Satsuma dwarf virus]
          Length = 1574

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/40 (95%), Positives = 38/40 (95%)
 Frame = -1

Query: 392 METYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 273
           ME YGFSP SFQDTESWKNSAFAACRGCKTYPIEEVGTDG
Sbjct: 1   MEIYGFSPFSFQDTESWKNSAFAACRGCKTYPIEEVGTDG 40



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -1

Query: 170 RAFEXXXXXXXXXXXALSAEGITDRSYKGRTYQVSTRGLSWKSVR 36
           RAF            AL AEG+ DRSYKGRTY+VS RGLSWKSVR
Sbjct: 97  RAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSVRGLSWKSVR 141


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