BLASTX nr result

ID: Atractylodes22_contig00001241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001241
         (1727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   479   e-132
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   466   e-129
ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional ...   459   e-126
ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional ...   458   e-126
ref|XP_002522953.1| nuclear acid binding protein, putative [Rici...   457   e-126

>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Vitis vinifera]
          Length = 417

 Score =  479 bits (1232), Expect = e-132
 Identities = 232/296 (78%), Positives = 260/296 (87%), Gaps = 2/296 (0%)
 Frame = -2

Query: 1309 YGAAPASS--DEIRSLWIGDLQYWMDETYVTNCFYNTGEVVSVKIIRNKQTGQPEGYGFI 1136
            Y AAP +S  +EIRSLWIGDLQ WM+E Y+  CF  TGEVVSVK+IRNKQTGQ EGYGFI
Sbjct: 77   YVAAPQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFI 136

Query: 1135 EFRSRAGAENALQTYNGTLMPSTEQNFRLNWATLGAGERRNDDTPDYTIFVGDLAADVSD 956
            E  +RA AE  LQTYNGTLMP++EQNFRLNWATLGAGERR DDTPDYTIFVGDLA+DV+D
Sbjct: 137  ELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTD 196

Query: 955  YILQETFKAVYPSIKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMSEMNGVLCSSRPMR 776
            Y+LQETF+  YPS+KGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM+EMNG+ CS+RPMR
Sbjct: 197  YVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMR 256

Query: 775  IGPAATKSGAGGGGMQKAPYQNAQGSQGESDPNNTTIFVGGLDPSVSDEALRQVFGQFGE 596
            IGPAATK   GG   QKA +QN QG+QGESDPNNTTIFVGGLD +V+D+ LRQVF Q+GE
Sbjct: 257  IGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGE 316

Query: 595  LIHVKIPVGKRCGFVQFANRACAEQALSILNGTELGGQNIRLSWGRSPSSKQGQSD 428
            L+HVKIPVGKRCGFVQFANRACAEQAL+ LNGT+LG Q+IRLSWGRSPS+KQ Q D
Sbjct: 317  LVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPD 372


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  466 bits (1199), Expect = e-129
 Identities = 229/296 (77%), Positives = 255/296 (86%), Gaps = 2/296 (0%)
 Frame = -2

Query: 1309 YGAAPASS--DEIRSLWIGDLQYWMDETYVTNCFYNTGEVVSVKIIRNKQTGQPEGYGFI 1136
            Y AAP +S  +EIRSLWIGDLQ WM+E Y   CF  TGEVVSVK+IRNKQTGQ EGYGFI
Sbjct: 62   YVAAPQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFI 121

Query: 1135 EFRSRAGAENALQTYNGTLMPSTEQNFRLNWATLGAGERRNDDTPDYTIFVGDLAADVSD 956
            E  +RA AE  LQTYNGTLMP++EQNFRLNWATLGAGERR DDTPDYTIFVGDLA+DV+D
Sbjct: 122  ELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTD 181

Query: 955  YILQETFKAVYPSIKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMSEMNGVLCSSRPMR 776
            Y+LQETF+  YPS+KGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM+EMNG+ CS+RPMR
Sbjct: 182  YVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMR 241

Query: 775  IGPAATKSGAGGGGMQKAPYQNAQGSQGESDPNNTTIFVGGLDPSVSDEALRQVFGQFGE 596
            IGPAATK   G      A +QN QG QGESDPNNTTIFVGGLD +V+D+ LRQVF Q+GE
Sbjct: 242  IGPAATKKPVG------ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGE 295

Query: 595  LIHVKIPVGKRCGFVQFANRACAEQALSILNGTELGGQNIRLSWGRSPSSKQGQSD 428
            L+HVKIPVGKRCGFVQFANRACAEQAL+ LNGT+LG Q+IRLSWGRSPS+KQ Q D
Sbjct: 296  LVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPD 351


>ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 402

 Score =  459 bits (1181), Expect = e-126
 Identities = 218/290 (75%), Positives = 250/290 (86%)
 Frame = -2

Query: 1297 PASSDEIRSLWIGDLQYWMDETYVTNCFYNTGEVVSVKIIRNKQTGQPEGYGFIEFRSRA 1118
            P S+DE+R+LWIGDLQYWMDE Y+  CF +TGE+ SVK+IRNKQT Q EGYGFIEF SRA
Sbjct: 58   PTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTSRA 117

Query: 1117 GAENALQTYNGTLMPSTEQNFRLNWATLGAGERRNDDTPDYTIFVGDLAADVSDYILQET 938
            GAE  LQTYNGT+MP+  QNFRLNWAT  AGERR+DD+PD+TIFVGDLAADV+DY+LQET
Sbjct: 118  GAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFVGDLAADVTDYLLQET 177

Query: 937  FKAVYPSIKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMSEMNGVLCSSRPMRIGPAAT 758
            F+A YPS KGAKVV DR TGR+KGYGFVRFGDESEQ+RAMSEM GVLCS+RPMRIGPA+ 
Sbjct: 178  FRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQGVLCSTRPMRIGPASN 237

Query: 757  KSGAGGGGMQKAPYQNAQGSQGESDPNNTTIFVGGLDPSVSDEALRQVFGQFGELIHVKI 578
            K+        KA YQN QG+Q E DPNNTTIFVG LDP+V+D+ LRQVFGQ+GEL+HVKI
Sbjct: 238  KN-PSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKI 296

Query: 577  PVGKRCGFVQFANRACAEQALSILNGTELGGQNIRLSWGRSPSSKQGQSD 428
            P GKRCGFVQFA+R+CAE+AL +LNGT LGGQN+RLSWGRSPS+KQ Q D
Sbjct: 297  PAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQPD 346


>ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 397

 Score =  458 bits (1179), Expect = e-126
 Identities = 218/290 (75%), Positives = 250/290 (86%)
 Frame = -2

Query: 1297 PASSDEIRSLWIGDLQYWMDETYVTNCFYNTGEVVSVKIIRNKQTGQPEGYGFIEFRSRA 1118
            P S+DE+R+LWIGDLQYWMDE Y+  C  +TGEV SVK+IRNKQT Q EGYGFIEF SRA
Sbjct: 54   PTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRA 113

Query: 1117 GAENALQTYNGTLMPSTEQNFRLNWATLGAGERRNDDTPDYTIFVGDLAADVSDYILQET 938
            GAE  LQTYNGT+MP+  QNFRLNWATL AGERR+DD+PD+TIFVGDLAADV+DY+LQET
Sbjct: 114  GAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQET 173

Query: 937  FKAVYPSIKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMSEMNGVLCSSRPMRIGPAAT 758
            F+A YPSIKGAKVV DR TGR+KGYGFVRFGDESEQ+RAM+EM GVLCS+RPMRIGPA+ 
Sbjct: 174  FRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPASN 233

Query: 757  KSGAGGGGMQKAPYQNAQGSQGESDPNNTTIFVGGLDPSVSDEALRQVFGQFGELIHVKI 578
            K+        KA YQN QG+Q E DPNNTTIFVG LDP+V+D+ LRQVFG +GEL+HVKI
Sbjct: 234  KN-PSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHYGELVHVKI 292

Query: 577  PVGKRCGFVQFANRACAEQALSILNGTELGGQNIRLSWGRSPSSKQGQSD 428
            P GKRCGFVQFA+R+CAE+AL +LNGT LGGQN+RLSWGRSPS+KQ Q D
Sbjct: 293  PAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPSNKQAQPD 342


>ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223537765|gb|EEF39383.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 404

 Score =  457 bits (1176), Expect = e-126
 Identities = 225/289 (77%), Positives = 247/289 (85%)
 Frame = -2

Query: 1294 ASSDEIRSLWIGDLQYWMDETYVTNCFYNTGEVVSVKIIRNKQTGQPEGYGFIEFRSRAG 1115
            A S EI+SLWIGDLQ WMDE Y+ N F  TGEVVS K+IRNKQTG PEGYGFIEF +RA 
Sbjct: 60   AESSEIKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAA 119

Query: 1114 AENALQTYNGTLMPSTEQNFRLNWATLGAGERRNDDTPDYTIFVGDLAADVSDYILQETF 935
            AE  LQTYNGT MP+TEQNFRLNWATL AGERR DD PDYT+FVGDLA DV+D+ILQETF
Sbjct: 120  AERILQTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETF 179

Query: 934  KAVYPSIKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMSEMNGVLCSSRPMRIGPAATK 755
            + VYPS+KGAKVVTDR TGR+KGYGFVRFGDE+EQ RAM EMNG  CS+R MRIGPAATK
Sbjct: 180  RTVYPSVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATK 239

Query: 754  SGAGGGGMQKAPYQNAQGSQGESDPNNTTIFVGGLDPSVSDEALRQVFGQFGELIHVKIP 575
              A     QKAPYQ+ QG+QGE+DPNNTTIFVG LDPSVSDE LRQVFG++GEL+HVKIP
Sbjct: 240  KPA-VQQYQKAPYQSTQGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIP 298

Query: 574  VGKRCGFVQFANRACAEQALSILNGTELGGQNIRLSWGRSPSSKQGQSD 428
             GKRCGFVQFANRACAEQAL  LNGT+L GQ+IRLSWGRSPS+KQ Q D
Sbjct: 299  AGKRCGFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPSNKQAQPD 347


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